Capnocytophaga sp. oral taxon 323: AM608_08285
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Entry
AM608_08285 CDS
T04076
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
col
Capnocytophaga sp. oral taxon 323
Pathway
col03030
DNA replication
col03410
Base excision repair
col03420
Nucleotide excision repair
col03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
col00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AM608_08285
03410 Base excision repair
AM608_08285
03420 Nucleotide excision repair
AM608_08285
03440 Homologous recombination
AM608_08285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
col03032
]
AM608_08285
03400 DNA repair and recombination proteins [BR:
col03400
]
AM608_08285
Enzymes [BR:
col01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AM608_08285
DNA replication proteins [BR:
col03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AM608_08285
DNA repair and recombination proteins [BR:
col03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AM608_08285
NER (nucleotide excision repair)
GGR (global genome repair) factors
AM608_08285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
Pro-kuma_activ
HHH
NYN_YacP
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ALC97641
UniProt:
A0A0M4GB95
LinkDB
All DBs
Position
complement(1917856..1920654)
Genome browser
AA seq
932 aa
AA seq
DB search
MKKRLFLLDAYALIFRGYYAFIKNPRINSKGLNTSAILGFMNSLLEVIKKEKPDHLAVAF
DKGGSVERTELFADYKANREETPEAIRLAIPYIHEILKALHIPIIEKEGYEADDIIGTLS
KQAEKQNYQVYMVTPDKDYAQLVSDNIFIYRPSRGGNDVEIWGVKEVQEKFEVQNPLQVI
DFLGMMGDAVDNIPGLPGVGEKTAKKLLADFGSMENLLAHTDQLKGKLRENIESNKEKGI
LSKQLATIMLDVPVTFDEEDFAMSEPDFEAVGRIFEELEFRQLLQNFLRTYQPQMTTTPP
PLTGNKPTEGQLSLFTQGDLFAQPQVMSEKKNSTNTPHFYQLADTPMAQQLLLQNLLQQT
EVCFDTETTSVNALEAELVGISFCWSAHKGYYVPFPTDKAEATKLLETFRPFFENERIGK
VGQNLKYDLKVLQNYNIEVRGALFDTMIAHYLLNPDMRHNMDILSETYLNYTPITIESLI
GKGKAQRSMRTVPLDQVKEYAVEDADVTWQLKNVFKEEMPKVNAEKIYTDLEAPLIKVLA
AMEREGVNLDVPFLKEYAKILDADIAQLEATIAEQAGESFNLASPKQLGDILFEKLKIDS
KPKKTKTGQYATSEEVLAPFASKHKIVADILEWRQVQKLKSTYVDALPLEVNKLTGRVHT
TYMQTVAATGRLSSNNPNLQNIPIRTPRGQQVRKAFIARNPDYVLLSADYSQIELRIIAA
LSEEHNMIDSFLRNEDIHRSTAAKVFHVPLEEVTREQRSHAKTVNFGIIYGVSAFGLSAQ
TNLSRSESKELIDTYYATYPNLRNYISKQIQFAQEHGYVETVLGRRRYLPDIHSRNQVVR
GAAERNAVNAPIQGSAADIIKIAMIRIQHELIRQQLQTRMLLQVHDELVFDVPKTELNIV
KPLIKEAMESAFNLAVPLVADLGVGDNWLDAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacggctttttctactcgatgcttatgcccttatttttaggggttattacgct
tttatcaagaatccgcgtatcaactccaaagggttgaacacgtcggctattttgggcttt
atgaactctcttttagaagtaattaaaaaagaaaagcccgaccaccttgctgtggctttc
gacaagggaggaagtgtggagcgcacggaactctttgccgactataaagccaatcgggag
gaaacgcccgaagctattcggttggcaatcccgtatattcacgaaatcttgaaagccttg
catattcctatcatcgaaaaagagggttatgaggctgacgatatcatcgggacactctct
aaacaagctgaaaagcagaattaccaagtgtatatggtaacgcccgataaggactatgca
caacttgtgagtgataatatctttatataccgaccttcgcgcggaggtaacgatgtggag
atttggggcgtaaaagaagtacaagagaaatttgaggtacaaaatcctttacaggtaata
gacttcctcggaatgatgggtgatgcggtagacaatatacctggactcccaggagtaggc
gagaagaccgctaaaaagctacttgctgactttggctctatggaaaaccttctcgcccat
actgaccagctgaaaggcaaactgcgtgagaatatagagagcaacaaggaaaaaggaatc
ctctctaaacagttggctaccattatgctggacgtgcctgtaacatttgatgaagaagac
tttgcgatgtccgaacccgattttgaagcggtagggaggatatttgaagagttagaattt
cgtcagttattacagaattttctcagaacgtatcagccccagatgacaacaacacccccg
ccacttacagggaataagcccacagagggacagttaagtctctttacgcaaggcgaccta
tttgcccaaccgcaggtaatgagcgagaagaagaacagcactaatacacctcacttctac
caattagccgataccccaatggcgcaacaactgcttttgcagaatttattgcaacaaacc
gaagtgtgttttgataccgaaacgaccagtgtgaacgccctggaagccgaattggtaggg
atttccttctgttggtcggctcataaaggttattacgtacctttccctactgataaagca
gaagcaacaaaactgcttgaaacttttcgtccgttctttgaaaatgagcgtattggtaag
gttggtcagaatttgaaatacgaccttaaagtattgcaaaactacaacattgaggtgcga
ggcgcactcttcgatacgatgatagcccactatctgctgaatccagatatgcgccacaat
atggatatcctcagtgaaacctatttaaactatacccctattactattgagagtttgata
ggtaaaggtaaggcacaacgctctatgcgtactgttccactcgaccaagtgaaggaatac
gccgtggaagatgctgatgttacgtggcaactcaaaaacgtatttaaggaggaaatgccc
aaagtgaatgccgagaaaatctatactgatttggaagcgcctttgataaaagtgttagcc
gctatggaacgcgaaggagtgaacctcgatgtacccttcttaaaagaatacgctaagatc
ttagatgctgatattgcacaactcgaagccactatagccgagcaggcaggagagagcttc
aatttggcatcgccgaaacagctaggagatattctttttgaaaaactgaaaattgacagt
aaacctaagaagacaaaaacaggtcagtatgccacttccgaagaagtattagcccccttt
gcttctaagcataagatagtagccgatatacttgaatggcgacaagtgcagaagctgaaa
tctacttatgtagatgccttgcctttggaggtgaacaaactcaccggtcgtgtacacact
acctatatgcaaacggtagctgcgacgggtagattgagcagtaataatcctaacttgcag
aatattcctatccgcactcctcgcggtcagcaggtgcgcaaggcgttcatcgcacgcaat
cctgattatgtgcttctctctgccgactattcgcaaatagagcttcgcatcatcgctgcc
ctgagcgaagaacacaatatgattgactcattcctccgcaatgaggatattcaccgttcc
acagctgccaaagtgttccacgtgcctttggaagaggtaactcgcgaacagcgtagtcac
gccaagacagtgaactttgggattatctatggtgtatcggcttttgggctctcggctcaa
accaatttgagtcgttcagagagtaaggaattgatagacacttattacgctacgtatccc
aatctgcgaaactatatcagtaagcaaatacaatttgctcaagaacacggctatgtagag
accgtattgggaaggcgtcgctatctacccgatattcactctcgtaaccaagtagtgcgc
ggagcagctgagcgcaacgctgtgaatgccccgatacagggttcggctgcggatatcatc
aaaattgcgatgatacgcatacaacacgagttgattcgccaacaacttcaaacccgtatg
ctcttgcaggtgcacgatgagttagtgtttgatgtacctaaaacagagctcaatatcgtt
aagcctctcattaaagaagcaatggaaagcgcttttaaccttgctgttccgcttgtggca
gatttaggggtaggggataactggctcgatgcacactag
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