Capnocytophaga sp. oral taxon 323: AM608_09775
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Entry
AM608_09775 CDS
T04076
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
col
Capnocytophaga sp. oral taxon 323
Pathway
col03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
col00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AM608_09775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
col03021
]
AM608_09775
03400 DNA repair and recombination proteins [BR:
col03400
]
AM608_09775
Enzymes [BR:
col01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AM608_09775
Transcription machinery [BR:
col03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AM608_09775
DNA repair and recombination proteins [BR:
col03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AM608_09775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF4249
Motif
Other DBs
NCBI-ProteinID:
ALC97903
UniProt:
A0A0M4H2R7
LinkDB
All DBs
Position
2232636..2233628
Genome browser
AA seq
330 aa
AA seq
DB search
MALFNFQKPDKVIMIESSDFEGRFEFRPLEPGYGLTIGNALRRVMLSSLEGFAITSVKFD
KVGHEFSTISGVREDVTEIILNLKQIRFKRQIEDIENETATITVSGKRQLTAGDFQKALS
GFQVLNTDLVICNMDSSASFTIEITIEKGRGYVSAEENAKPNAPIGVIATDAIFTPIKNV
KYSIENYRVEQKTDYEKLVFEIKTDGSIHPKQALTEAAKTLIHHFMLFSDERITLEADEI
AQTDTYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVETLGDLVSFNKADLMKFRNFG
KKSLIELDELVVNKGLVFGMDTSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcattattcaacttccaaaaaccagataaagttataatgattgaatcatctgatttc
gaaggacgatttgagtttcgccctttggaaccagggtatggtttaacaataggtaacgca
ttacgaagagttatgctttcttcgttagaaggttttgcaatcacttctgtgaaatttgat
aaagtaggacacgaattttctactatatcaggagtaagagaagatgttactgaaattatt
ctcaatttgaaacaaatacgttttaaacgccagattgaggatatagaaaacgaaacagca
actattactgtttctggtaaaagacaattgactgccggtgattttcaaaaagctctttca
ggttttcaagtattaaatactgatttggtgatttgcaatatggattcttcagcttctttt
acaatagagattactattgagaaaggacgcggttatgtttcggctgaggaaaatgcaaaa
ccaaatgcaccgataggtgtaattgctactgatgcaatctttacacctattaaaaatgtg
aaatattctattgaaaattatcgtgttgaacaaaaaacagactacgagaagttagtcttt
gaaattaaaaccgatgggtctatacaccctaaacaagcacttacagaagctgcaaaaaca
ctcattcatcactttatgctcttctctgacgagagaattactttagaggctgatgaaata
gcacaaactgatacttatgatgaagaatcattgcatatgcgccagttgctaaaaactaag
ttggtggatatggacttatccgttcgtgcactcaattgtttgaaagctgccgaagtagaa
acattaggtgatttggtatctttcaataaagctgatttgatgaagtttagaaacttcgga
aagaaatcattaattgagcttgatgagttggtagtcaataaaggtttagtgtttggtatg
gacacctcgaagtataaattggataaagattaa
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