Colwellia sp. Arc7-D: DBO93_02420
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Entry
DBO93_02420 CDS
T05422
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola00071
Fatty acid degradation
cola00280
Valine, leucine and isoleucine degradation
cola00310
Lysine degradation
cola00362
Benzoate degradation
cola00380
Tryptophan metabolism
cola00410
beta-Alanine metabolism
cola00640
Propanoate metabolism
cola00650
Butanoate metabolism
cola00907
Pinene, camphor and geraniol degradation
cola00930
Caprolactam degradation
cola01100
Metabolic pathways
cola01110
Biosynthesis of secondary metabolites
cola01120
Microbial metabolism in diverse environments
cola01200
Carbon metabolism
cola01212
Fatty acid metabolism
Module
cola_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DBO93_02420
00650 Butanoate metabolism
DBO93_02420
09103 Lipid metabolism
00071 Fatty acid degradation
DBO93_02420
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DBO93_02420
00310 Lysine degradation
DBO93_02420
00380 Tryptophan metabolism
DBO93_02420
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DBO93_02420
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
DBO93_02420
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DBO93_02420
00930 Caprolactam degradation
DBO93_02420
Enzymes [BR:
cola01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DBO93_02420
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
DBO93_02420
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
DBO93_02420
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
DBO93_02420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
ZirS_C
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AWB56530
LinkDB
All DBs
Position
556606..558768
Genome browser
AA seq
720 aa
AA seq
DB search
MLFQGKSLSAKLLDDGIVEFKFDAQGSVNKFDQATFKEYIAIIDAINNCSEAKGVLITSG
KSSFIVGADITEFLETFKKPEDELLPWVKQASDIFDSFEDINLPTVVAINGFALGGGCEM
TLACDYRIADTTCSIGLPEVNLGLIPGFGGTVRLPRVIGADNAIEWMSTGRAFKAEQAMA
VGLLDAVVAPEHLREAAIKMLNQAIAGKLDWRAKRQPKLEPLKLSPTETIMTFNTCKGMI
AAKAGKHYPAPMMMVKTIEAAAGLDRAGAMALENAGFAKLAKTDVATAQIGLFMADQVVK
GKAKKAGKQATKAVNKAAVLGAGIMGGGIAYQSAYKGTPIIMKDINDQALDLGLSTAAGI
LTKQVERGRMTVKKMAGVLNSITPSLSYDSVKDVDIVVEAVVENPKVKAMVLAEVESHVS
EDTIVTSNTSTISIDLLAEGLKRKDKFCGMHFFNPVNKMPLVEVIRGKETSDETVAAVVA
YAAKMGKSPIVVNDCPGFYINRVLFPYFAGFSQLVLEGADFVAVDKVMEKQFGWPMGPAY
LLDVVGIDTADHCTGVMSAGFPTRMSKIDNDPVSALYNKDRLGQKNGKGFYDYGKDKRGR
PTKVAAQVAYDLFAGVEKKDFSQDETIARLMIPMVNEVVRCLEEGVVDTAAEADMGLIYG
LGFPPFRGGPIRYLETLGLDNFIAMADKYAHLGEIYQVTDGMRAMAKSGQSYFTTDVKTA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttatttcaaggcaaaagcctttctgccaagttgttagatgatggcattgtcgaattt
aaattcgatgcacaaggctcagttaacaagtttgatcaggcaacctttaaagaatatatc
gccattattgatgcgataaataattgcagtgaagctaaaggagtattaattacttcaggt
aagtcttcatttatcgttggtgctgatatcaccgagtttttagaaacatttaaaaagccg
gaagacgaattattaccttgggtaaaacaagcctccgatatttttgactcatttgaagat
attaatcttcctaccgtcgttgccatcaatggctttgcgttaggtggtggttgtgagatg
accttagcgtgtgattatcgtattgctgataccacatgttcaatcggcttacctgaagtt
aacttaggtttaatccctggttttggtggtactgtacgtttaccacgtgtaattggcgct
gataatgccattgaatggatgtcgacaggccgagcttttaaagctgaacaagcaatggct
gtaggattacttgatgcagttgtagcaccagaacacttgcgtgaagcagcaataaaaatg
cttaatcaagctattgcaggcaaattagattggcgtgctaagcgtcagcctaaactagag
ccattaaagctttcaccaacagaaacgattatgacctttaatacgtgtaaaggcatgatt
gcagcgaaagcgggtaaacattacccagcacctatgatgatggtgaaaaccattgaagct
gccgcaggtttagatcgtgctggcgcaatggcattagaaaatgccggttttgcaaaatta
gcgaaaaccgacgtagctactgcacaaattggcctatttatggccgatcaggtagtgaaa
ggaaaagcgaaaaaagccggtaaacaagccactaaagctgtaaataaagcggctgtgttg
ggtgcaggaattatgggtggtggtattgcttaccagtcagcctataaaggcacgccaatt
atcatgaaagatattaacgaccaagcgcttgatttaggcttatcaactgctgcaggtatt
ttaactaagcaagttgaacgtggtcgcatgacggttaagaaaatggctggtgtacttaat
agtattaccccgtcattaagttacgacagcgttaaagatgttgatattgttgttgaagct
gttgtagaaaatccaaaagttaaagcaatggttttagctgaagttgaaagtcatgttagc
gaagacaccatcgtgacttcaaatacctctactatttcaattgatttattagcagaaggc
cttaaacgtaaagataaattttgtggcatgcatttcttcaacccggtaaacaaaatgcca
ttagttgaagttattcgtggtaaagaaacttcagatgaaaccgttgctgctgttgtagcc
tacgctgcgaaaatgggtaaatcacctatcgtagttaacgattgtcctggtttttatatc
aaccgtgttttattcccatactttgccggctttagccaattagtacttgaaggtgctgat
tttgttgctgttgataaagtaatggaaaagcaattcggttggccaatgggccctgcatat
ttacttgatgttgttggtattgatactgcagatcattgtaccggtgttatgtctgctggt
ttcccaacgcgtatgtctaaaattgataatgacccagtaagcgctttatataataaagat
cgcttaggtcagaaaaatggtaaaggcttttacgattacggtaaagataagcgcggtcgt
ccaacgaaagttgcggcacaagtggcttatgatttatttgctggcgttgagaaaaaagat
tttagccaagacgaaactatcgctcgtttgatgatccctatggtgaatgaagttgtgcgc
tgtttagaagaaggtgtggttgataccgcagctgaagctgacatgggcttgatatacggc
ttaggttttcctccatttagaggtggtccaattcgttatttagaaacattaggtttagat
aactttattgcaatggctgataaatacgcgcacttaggcgaaatttatcaagtaactgac
ggtatgcgcgcaatggcgaaatctggtcagtcatattttacaaccgatgttaaaacagct
taa
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