Colwellia sp. Arc7-D: DBO93_02955
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Entry
DBO93_02955 CDS
T05422
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola00550
Peptidoglycan biosynthesis
cola01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DBO93_02955 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cola01003
]
DBO93_02955 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cola01011
]
DBO93_02955 (mrcB)
Enzymes [BR:
cola01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
DBO93_02955 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DBO93_02955 (mrcB)
Glycosyltransferases [BR:
cola01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
DBO93_02955 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cola01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
DBO93_02955 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Motif
Other DBs
NCBI-ProteinID:
AWB56624
LinkDB
All DBs
Position
678621..680984
Genome browser
AA seq
787 aa
AA seq
DB search
MTVKKAPQTASKKSKANQPTTSQASEEITGHRVKRILRWSFWFLLKVTLIGVFVLFLYSI
YLDGKVRDKFEGQRWQVPVQVFGAVEEYKIGSKLILTNLQKALTANRYKKVTHVHRPGEF
ALSKSRAIIYRRAFDFGAGVEPANKVTLDIANDKVKALYINDEKVTQLRLEPLLLDRILP
ESKEDRVLVSLQAVPTKLLDTLLLIEDREFYFHHGVSPLGILRALYQNLMAGRTVQGGST
LTQQLVKNMFLTRDKTLWRKANEAIMALILEYRYSKDQLLEAYINEVYLGQHYANGIYGF
GLAAEFYFGKSIQSLNTEQMAMIIGQVKGPSYYDPWRFPERTIKRRDLVLRLMYQQEIIS
QPEFEQAVESPLSIRKKRRVKQQKFPAYLQLVKAELSQHLSQYQQQSGVRVFTGFSINQQ
LALQASIDEKLPALEQGSAAELQVAMVVSDFKSGEIRALVGGKEAGYAGFNRALHAKRPI
GSLIKPAVFLGALERYQRFNLATLIEDKAITLSSEDGQAWRPKNYDGKYRGQVHLIEALV
SSLNVPTVNLGMQLGLDNVAQAIHLLGYQDDIVTRPSMLLGSLNMSPIEINQLYIPIANK
GVAEKSHAITRVVSGSGETLWQFQALEQQIISTQAAYLLDFSLNKVTTSGTARSLAWRLK
DINLSGKTGTTNDLRDSWFVGYDNNLLVTTWIGRDDNKPTKLTGSSGALVLFAEFMHKNG
AVSRRTQVPESIDLVRFDNKSGRPVTQNCDNSQMLPAVTTGLIYETACEEAPTKNKKKSW
LEKLFGN
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcaaaaaagcgccgcaaacagccagtaaaaaatcaaaagctaaccaaccgaca
acctcacaggcgagcgaagaaataacgggtcaccgggtaaaaagaatattacgttggtca
ttttggtttttgttaaaagtaacgcttataggcgtatttgtactgtttctttacagtatt
tatctcgacggaaaagttcgtgacaagtttgaaggtcaacgctggcaggtacccgttcaa
gtgtttggtgctgtagaagaatataaaattggcagcaagttaatacttactaaccttcag
aaagctttaaccgctaataggtataaaaaagtcacgcatgttcatcgccctggtgaattt
gctttatcaaaaagtcgtgcgattatttaccgtcgtgcatttgattttggcgcgggtgtg
gagccggcaaataaagtcaccctcgatattgctaacgacaaagttaaggccttgtatatt
aatgatgaaaaagtcactcaattacgtttagaaccgcttttacttgatagaattttacca
gagagcaaagaagatcgagtgctagtttctttacaagcggtgccgacaaaactattagat
actttgttattaattgaagaccgagagttttactttcatcatggtgtttcacctctgggt
attttacgtgccctttatcaaaatttaatggcaggtcgaacggttcaaggtggcagcacc
ttaacgcagcaattagttaaaaatatgtttttaacgcgcgataaaaccttatggcgtaaa
gctaatgaagccattatggcgctgatattggagtatcgatacagcaaagatcaattgtta
gaagcgtacataaacgaggtatatctaggtcaacattatgccaacggtatttatggtttt
gggctagcagcagaattttactttggtaagtcaattcaatcgcttaatacagaacaaatg
gcgatgattattggtcaagttaaagggccaagttactatgacccttggcgctttcctgaa
cgcaccattaaacgtcgagatctagttttaaggttaatgtatcagcaagaaattatttcg
cagcctgaatttgagcaagcagttgaatcgcctttatcaattcgaaagaaacgtcgtgta
aaacaacaaaaatttccagcctacctgcaattggttaaagctgaactgtcgcaacattta
tcacaataccaacagcaatcaggtgtgcgagtgtttaccggtttttcaattaatcaacag
ttagccctgcaagcgagcattgatgaaaaattacctgctttggagcaaggttctgccgct
gaattacaagtggcgatggtggtctctgattttaaatcaggtgagattcgtgctttagtc
ggtgggaaggaggccggttatgctggttttaaccgtgcattacacgctaagcgacctatt
ggctcgctgattaaacctgccgtatttcttggtgctttggagcgttatcagcgttttaat
ttagcgacattaattgaagataaagccataactctgtcaagtgaagacggccaagcttgg
cgacctaaaaattacgatggtaaatatagaggccaagtgcacttgattgaagccttagta
tctagcctgaacgtgcctacggtgaatttaggtatgcaattaggcttagataatgttgct
caagctattcatttgttaggttatcaggatgatattgttacgcgtccttcgatgttattg
ggctcattaaatatgtcacccattgaaataaatcaactctatatccctattgctaataaa
ggtgtggctgaaaagtcgcacgcgataacacgtgttgttagtgggagcggtgaaacctta
tggcaatttcaagcgttagagcaacaaattatttcgactcaagcggcttatttactcgac
ttctcgttaaataaagttacaacgtcaggtactgctcggtcactggcatggcgattaaaa
gatataaatttatctggcaaaacgggcacaaccaatgatcttcgagacagctggtttgtt
ggttatgacaacaaccttttagtcaccacgtggataggacgagacgataacaaaccaact
aaactcaccggtagcagtggagccttagtattatttgccgaatttatgcataaaaatggt
gcagtgagtcgacgcactcaggtacctgaaagtatagatttagtgcgctttgacaataaa
agcgggcgccccgttacgcaaaattgcgataactcgcaaatgctgccagcggtaaccacg
ggattaatttatgaaacggcatgtgaagaagcaccgaccaaaaacaagaaaaaatcttgg
ttagaaaaattatttggtaattag
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