Colwellia sp. Arc7-D: DBO93_03090
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Entry
DBO93_03090 CDS
T05422
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
cola
Colwellia sp. Arc7-D
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cola03400
]
DBO93_03090
Enzymes [BR:
cola01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
DBO93_03090
DNA repair and recombination proteins [BR:
cola03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
DBO93_03090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Prp19
Motif
Other DBs
NCBI-ProteinID:
AWB56643
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All DBs
Position
714314..715864
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AA seq
516 aa
AA seq
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MKAKHLRLLLGDQLNPMHSWFEKVDSDVVYVIAELHQEANYTKHHIQKISAFFASMADFA
NQLERAGHQVCYLTLDDTEKHQDLPALIESLMTNFCCESFAFQRPDEYRLRTQLNTMKQQ
LSQTVVEVDSEHFLLPFEELPSHFQQATHVRMENFYRYMRKRFAILMNGSKPEGNAWNFD
ANNRQSFKRSDLKFIPKPLIFDNEADEYLQRIKKHNIKTIGQESANVTYPINREQSLSLL
QFFCQHQLANFGNFQDAMTVASPYAWSLYHSRLSFSLNCKMLSPAEVIQTALDAYQNSAG
AITLAQVEGFIRQILGWREYVRGMYWANMPNYAEQNFLAANRNLPDFFWHGNTHMLCLKS
AITQSLEHAYAHHIQRLMITGNFALLAGISPSQVDDWYLGIYIDAIEWVELPNTRSMALF
SDGGWIATKPYAASGNYVNKMSDYCKGCQYNVKEKIGPNACPLNSLYWNFIDHNYDKFST
NHRMSFPIRNWDKMATEQKDEIRVKAAELLNNLDGL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaagcaccttaggcttttattaggcgaccaactcaatcccatgcacagttgg
tttgaaaaggttgatagcgatgtggtgtatgttatagccgaacttcaccaagaggctaat
tacactaagcaccatatccaaaaaataagcgcattttttgcctccatggccgattttgcg
aaccaacttgaacgtgcagggcaccaagtttgctacttaacgctagatgatactgaaaaa
catcaagatcttcctgcacttattgaatcattaatgaccaatttttgctgcgaaagcttt
gcttttcaacgaccagatgaatatcgactacgtacacaattaaataccatgaagcagcaa
ctttcccaaacggttgttgaggtagatagtgaacattttttgctaccatttgaagaatta
ccaagccattttcaacaagctacacacgtgcgaatggagaatttttatcgctacatgcga
aaacgctttgcaattctcatgaatggctcaaaacctgaaggcaatgcctggaacttcgat
gcaaataatagacagtcatttaaacgctctgatcttaaatttattccgaaaccgttaata
ttcgataacgaagccgatgaatatttacaacgaataaaaaaacataacattaaaactatc
ggacaagagtcagcaaatgttacatacccgattaatcgtgaacaatcattgtcattgctg
cagtttttttgccagcatcagctagccaactttgggaattttcaagatgcgatgacagta
gcttcaccctacgcttggagtttatatcattcgcggcttagtttttctctcaattgtaaa
atgttaagcccagcagaggtaattcaaaccgcacttgacgcttaccaaaactcagcgggt
gctataacactagctcaagttgaaggatttattaggcaaattttaggctggcgggaatat
gtcagagggatgtattgggcaaatatgcctaattatgcagagcaaaattttttagcggct
aatcgtaatctacctgactttttttggcatggtaatactcatatgttgtgcttaaaaagt
gcaataacgcaatctttagaacatgcttatgcacaccatattcaacggctaatgatcacc
ggtaactttgctttgctggcaggcatatcaccaagccaagtagatgattggtatttaggc
atatacatagatgcgattgaatgggtagagctgccaaatacacgcagtatggcgcttttt
tctgatggcggctggattgcaacaaagccttacgcggctagcggcaattatgttaataaa
atgagtgattactgtaaaggttgccaatataacgtgaaagaaaagatagggccaaatgct
tgcccacttaatagcttatattggaattttattgaccataactatgataagttttcgacc
aaccatagaatgagttttcctattcgtaattgggataaaatggctaccgagcaaaaagat
gaaataagggtaaaagcggctgagttattaaataatttagatggtttatag
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