Colwellia sp. Arc7-D: DBO93_03485
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Entry
DBO93_03485 CDS
T05422
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola02020
Two-component system
cola02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DBO93_03485
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DBO93_03485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cola02022
]
DBO93_03485
02035 Bacterial motility proteins [BR:
cola02035
]
DBO93_03485
Two-component system [BR:
cola02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
DBO93_03485
Bacterial motility proteins [BR:
cola02035
]
Flagellar system
Flagellar assembly proteins
Others
DBO93_03485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_30
Mg_chelatase
HTH_24
MerR
AAA
FleQ
AAA_16
HTH_23
HTH_20
HTH_28
MCM
HTH_11
Sigma70_r4_2
nSTAND3
AAA_7
HTH_Tnp_ISL3
DUF2089
HTH_AsnC-type
AAA_19
AbiEi_4
AAA_3
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AWB56716
LinkDB
All DBs
Position
806190..807530
Genome browser
AA seq
446 aa
AA seq
DB search
MTTSKIMVVEDDAGLREALVDTLLLAGYQCVAVDSGEEALIKLKSHAVDLVVSDVQMGGM
SGLSLLKSIRNNHSKLPVLIMTAYGTIDDAVQAMRDGACNYMAKPFAPEVLLNMVSQYVQ
IQTNDGCDPVVADTQSLELLKLAKKVANTEASVMVLGPSGSGKEVLAQYIHNYSPRSQAP
FVAINCAAIPENMLEATLFGYEKGAFTGAIQASPGKFEQAQGGTILLDEITEMDLGLQAK
ILRVLQEREVERIGGRKTINLDVRVIATSNRDLKDAVKEGVFREDLYYRLNVFPLSWLPL
NERRDDILPLATHLISRICQKDGNVIPEFTPAARSKLLAYAWPGNVRELDNVIQRALILQ
SDRCIDANDLLIDNFETPQVQSDTVDASKADKLGSELKLQEHQIILDTLHACRGSRKDVA
ERLGISPRTLRYKIARMRDSGIQIPL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaagtaaaattatggtagtcgaagacgatgctggacttagagaagcattagtt
gatactttgttgttagcaggttaccaatgtgtcgccgttgactctggcgaagaagcgctt
ataaaattaaagtcacatgcggtcgatttagtggttagtgacgtccaaatgggcggcatg
tcaggactatcgttattaaaaagtatacgcaataatcactctaaattaccggtattaatt
atgactgcctacggcactatagatgatgctgtacaagcaatgcgagacggtgcttgtaat
tatatggctaaaccttttgcgccagaagttttacttaatatggtcagccagtatgtacaa
atacaaacaaatgacggttgcgacccagtggttgctgacacgcaaagtcttgagctactc
aaactagctaaaaaggtagcaaatacagaagcttccgttatggtactcgggccgagtggc
tcaggtaaggaagtacttgcacaatatattcataattactcaccacgcagtcaagcccct
tttgtcgcaataaattgtgcggcaattccagagaatatgcttgaagcaaccttatttggt
tatgaaaagggcgcgtttacgggcgctattcaagctagtcctggtaagttcgagcaagct
caaggtggcactattctacttgatgaaattaccgaaatggatttaggcttacaagcaaaa
attcttcgtgttttacaagagcgagaagtagagcgtattggcggacgtaaaacaattaac
ctagacgttagagtaatagcaaccagtaaccgtgacttaaaagatgctgttaaagaaggc
gtttttagagaagatttatattaccgattaaatgtattcccattatcatggttaccgttg
aatgaacgccgagatgatattttacccttagcaacccatcttatttcgcgcatttgtcaa
aaagatggcaatgttattcctgaattcacaccagcagctcgcagtaaattactcgcctat
gcttggccaggtaatgtgcgtgaattagacaatgttattcaacgagcactgattttacaa
agtgatcgttgtatcgacgctaatgacttactgattgataactttgaaacgcctcaagtg
caaagtgacaccgttgacgcttcaaaagctgacaaactcggcagtgaacttaaattacaa
gagcaccaaatcatattagacactttgcatgcttgtcgaggaagccgcaaagatgttgcc
gaacgtttgggaataagccctcgtacattacgttataaaattgcccgtatgcgtgatagt
ggtattcaaattccactttaa
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