Colwellia sp. Arc7-D: DBO93_03910
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Entry
DBO93_03910 CDS
T05422
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola00071
Fatty acid degradation
cola00280
Valine, leucine and isoleucine degradation
cola00310
Lysine degradation
cola00362
Benzoate degradation
cola00380
Tryptophan metabolism
cola00410
beta-Alanine metabolism
cola00640
Propanoate metabolism
cola00650
Butanoate metabolism
cola00907
Pinene, camphor and geraniol degradation
cola00930
Caprolactam degradation
cola01100
Metabolic pathways
cola01110
Biosynthesis of secondary metabolites
cola01120
Microbial metabolism in diverse environments
cola01200
Carbon metabolism
cola01212
Fatty acid metabolism
Module
cola_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DBO93_03910
00650 Butanoate metabolism
DBO93_03910
09103 Lipid metabolism
00071 Fatty acid degradation
DBO93_03910
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DBO93_03910
00310 Lysine degradation
DBO93_03910
00380 Tryptophan metabolism
DBO93_03910
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DBO93_03910
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
DBO93_03910
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DBO93_03910
00930 Caprolactam degradation
DBO93_03910
Enzymes [BR:
cola01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DBO93_03910
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
DBO93_03910
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
DBO93_03910
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AWB56790
LinkDB
All DBs
Position
891938..894088
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AA seq
716 aa
AA seq
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MTDVKITEQENNKTFSLARQENGIAHLIMDVKGDSMNTLKAEFGDEISEILKEIRQDQTI
AGIVLVSGKTDSFVAGADVHMLANCTSASEATALSRQGQMIFDQLENLSIPVVAAVHGAC
LGGGLELAMACHAIVCSDSPKTALGLPEVQLGLLPGGGGTQRLPKRVGIQKALDMMLTGK
QLRAKQALKAGLVSDVVPNSVLLQTAEKLALSGKVKPKARKLSMMDKLLEGNGLGRSVLF
SKATKMVLSQTKGNYPAPLKIIECIRASVEQAPSKGYQVEADHFGQLVMSDVSAQLRQLF
FATTDMKKEQGVAGVAPEKITKAAVLGGGLMGGGIAFVTATKAKLPVRIKDISHQGISYA
LKYGYDLLNKKVKRRFMRHSEMQSQLALITGTTDYTGFNDVDIVVEAVFEDLTLKQKMVA
DIESHCKEETIFASNTSSLPIGQIAEKALRPENVIGLHYFSPVDKMPLAEIIAHEKTSDQ
TISTTVAFAKQQGKTPIVVKDKAGFYVNRILAPYMNEAAILLLEGCSIEALDKAMVKFGF
PVGPMQLLDEVGIDVGAKIGPILQAELGERFAPPAAFSKLIDDGRLGKKVKKGFYQYNTK
SKKKLVDDSVYTLLGLQVSNTTVTDAQAERCVYMMLNEAARCLDEGIVRNARDGDIGAIF
GIGFPPFLGGPFQYMDKIGATTLVSKLSQWQAEFGERFTPCDALIKMAEQGESYYN
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgtaaaaattacagaacaagaaaataacaagacctttagcttggcgcgccaa
gaaaatggcattgcacatttaattatggatgttaaaggcgactccatgaatacgctaaaa
gctgagtttggcgatgaaatttcagaaatattaaaagagatacgtcaagatcaaacaatt
gcaggcattgttttagtcagtggtaaaaccgattcttttgtcgcaggtgctgacgtacac
atgttagcgaactgtacttctgcttcggaagccacggctttatctcgccaaggtcaaatg
atttttgatcaactagagaacttatctattccggttgtagcagccgttcatggtgcttgt
ttaggcggtggattagaacttgctatggcgtgtcatgccatagtgtgtagtgatagtcct
aaaacagcgttaggcttgccggaagtacaattaggtttgctgcctggcggcggcggaaca
caaagactacccaagcgagttggtattcaaaaagcattagatatgatgctaaccggtaaa
cagcttcgtgctaagcaagcattaaaggctggcttagttagtgatgtagtgccgaatagt
gttttgcttcaaacagcagaaaaattagcgttgtctggtaaggtaaaacctaaagctcgt
aaattatcaatgatggataagttgcttgaaggcaacggtttaggtcgaagcgttttattt
agtaaagcaaccaaaatggtgttaagccaaactaaaggaaattaccctgcacctttaaaa
ataattgaatgcattagagcaagtgtagagcaagcgccttcaaaaggttatcaagtggaa
gccgaccattttggtcaattagtaatgtcagatgtttcagcgcagcttagacaactattt
tttgcaacaactgatatgaagaaagagcaaggagtagcaggtgttgctccagaaaaaatt
acaaaagccgcggtacttggtggtgggttaatgggcggtggtattgcttttgttacggca
acaaaagctaaattacccgtgcgtattaaagatatttcacatcaaggtattagttatgcc
ttgaagtatggttatgacttgttaaataaaaaagttaaacgccgttttatgcgccatagc
gaaatgcaaagtcagctagcgttaattacaggcactactgattatacgggctttaatgac
gtagatattgttgttgaagcggtatttgaagatctaacattaaaacaaaagatggttgca
gacattgaaagccattgtaaagaagaaactatttttgccagtaatacttcaagtttgcct
attggccaaatagcagagaaagctttacgtcctgaaaatgttattggactacattatttt
tcgcctgttgataaaatgccgttagctgagatcattgctcatgagaagacctcagatcaa
accatttctacaaccgttgcgtttgctaaacaacaaggtaaaacaccgattgttgttaaa
gacaaagcaggattttatgtcaatagaattttagcgccttacatgaatgaggcggctatt
ttattattggaaggttgctcaattgaagcacttgataaagccatggttaaatttggtttt
cctgttggacctatgcagttattagatgaagtgggtattgatgtaggtgctaaaattggt
cctattttacaagcagagctaggtgagcgatttgcaccacctgccgcattttctaaatta
attgatgacggccgtttaggtaaaaaagttaaaaaaggcttttatcaatacaataccaag
agtaagaagaaattagttgatgatagtgtatataccctattaggtctgcaagttagtaat
acaaccgtgacagatgcgcaagctgagcgttgtgtttatatgatgcttaatgaagcggct
cgttgccttgatgaaggaatagttcgaaatgcgcgagacggagatattggcgctatattt
gggattggcttccctccattccttggtggaccattccaatatatggataaaataggtgct
acaacgctagtaagtaaactcagccaatggcaagctgaattcggtgaacgatttacacct
tgtgatgcattaataaaaatggctgagcaaggcgagagctattataactag
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