Colwellia sp. Arc7-D: DBO93_03975
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Entry
DBO93_03975 CDS
T05422
Name
(GenBank) septal ring lytic transglycosylase RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
cola
Colwellia sp. Arc7-D
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cola01011
]
DBO93_03975
Enzymes [BR:
cola01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DBO93_03975
Peptidoglycan biosynthesis and degradation proteins [BR:
cola01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DBO93_03975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
DUF7537
Med7
Motif
Other DBs
NCBI-ProteinID:
AWB56802
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All DBs
Position
complement(910150..911058)
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AA seq
302 aa
AA seq
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MEKLNTTLLICIILLLTVMSACSTQNNNSRYQQKHDSTPTRTPNASELINATPRAETHSR
GGNKHYQVFGKHYQVLKTAENFSQTGTASWYGKKFHGHLTSNGEIYDMYAMSAAHKNLPL
PTYLKVTNNSNAKSVIVRVNDRGPFHQSRIIDLSYSAAYKLDMLKTGTADVTITAINDFS
AEGIEKLQLNTPHLTADNTVITALPKEKVVTIPHAGIKQVQDKTLSSPAFKNKFIQVFAS
KSQLQASKIAKALLQQHKKNTQIEEKNGIFRVLVGPIITNDELTRLLLAIKDNGHPKAFI
RK
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattaaacacaaccctgcttatctgcataattttacttctaacagtaatgtct
gcttgtagtactcaaaataacaatagccgttaccaacaaaagcatgatagtacgccaacg
cgcacgcctaatgccagtgaacttattaacgctacgcctcgagcagaaacacatagccga
ggaggcaacaaacattaccaagtatttggcaaacattaccaagtactaaaaacggcagaa
aactttagccaaacaggaacagcctcgtggtatggcaaaaaatttcatggtcatttaacg
tcaaacggtgaaatttatgacatgtacgcaatgagtgcggcacataaaaacttaccactg
cccacctatttaaaagtaaccaacaatagtaacgcaaagtcagttattgtgagagtgaat
gatcgaggcccatttcatcaaagtcggatcatagatttgtcttatagtgcggcttataaa
ctcgatatgctaaaaacaggcacagctgatgtcactattacagcaattaatgattttagc
gctgaaggtatagaaaaactgcaacttaacacgcctcacctaactgccgacaatactgtt
attacggcattaccaaaagaaaaagtggttactattcctcatgcaggcataaagcaggtt
caggataagacattatcttcgcctgcttttaaaaataaatttatacaggtttttgccagt
aaaagtcagcttcaagcatctaaaattgcaaaggcattattacaacaacataaaaagaat
acacaaatagaagaaaaaaatggaatttttcgagtccttgttggtccgataataactaac
gatgaattaacgcgtttattattagcgattaaagacaatggtcaccctaaagcttttatt
cgaaaatag
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