Colwellia sp. Arc7-D: DBO93_04640
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Entry
DBO93_04640 CDS
T05422
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
cola
Colwellia sp. Arc7-D
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cola03032
]
DBO93_04640
03036 Chromosome and associated proteins [BR:
cola03036
]
DBO93_04640
03400 DNA repair and recombination proteins [BR:
cola03400
]
DBO93_04640
DNA replication proteins [BR:
cola03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DBO93_04640
Chromosome and associated proteins [BR:
cola03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DBO93_04640
DNA repair and recombination proteins [BR:
cola03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DBO93_04640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Arteri_nsp7a
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AWB56915
LinkDB
All DBs
Position
1066034..1066309
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSQLIEKIAAGADISKAAAGRALDSFIEAVTEELKGGDQVALVGFGTFSVRDRAARTG
RNPQTGATIEIAAAKIPSFKAGKALKDACNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaactaatcgagaaaattgctgctggcgctgacatttctaaagctgcg
gctggtcgtgcattagattcatttatcgaagcagttacagaagaattaaagggtggcgat
caagttgctcttgtaggttttggtactttttcagtacgtgaccgtgcagcacgcacaggc
cgtaacccacaaactggtgcgactattgaaatcgcagcagctaaaattccatcttttaaa
gctggtaaagcacttaaagatgcatgtaatggctaa
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