Colwellia sp. Arc7-D: DBO93_05855
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Entry
DBO93_05855 CDS
T05422
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cola
Colwellia sp. Arc7-D
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cola03400
]
DBO93_05855
DNA repair and recombination proteins [BR:
cola03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DBO93_05855
Archaeal homologous recombinant proteins
DBO93_05855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AWB57125
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Position
1344922..1346271
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AA seq
449 aa
AA seq
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MRIIHTSDWHLGQHFYGKSRAREHQQFLNWLIEQSQVQQIDAIIVAGDIFDTGTPPSYAR
EMYFDFIAKLHQTCCQLVVLAGNHDSVAMLGESQKLLQQLSTRVISAVSDNIAEQVFVLE
SLKTDQQAVICAIPFIRARDIVKSYAGQSASEKQRSLQQAITSHYQSLFAHAQTLSVENQ
ATDTRLPIIATGHLTTIGASVSESVRDIYIGTLEAFPASEFPAADYIALGHIHRPQKVTK
SEHIRYSGSPIALSFDEANTQKSIVIAEFKDGKLSDVELTHVPCFQPLAMVKTQLDTLSE
DIAGVAKTQSTEPVNAKDASNTADIAEKIWLDIEIESVEYLQDLTARIEQIVAELPVEVL
LVRRSKKSRQQMPSHEKKITLSELSVQDVFDARMEIEPWETNEQQARKVRLNSLYLEIAE
QTQLASAAKPSLDKNSTIDNSSDTKAEQK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattattcacacatccgactggcatttaggccaacatttttacggcaaaagtcga
gcacgtgaacatcaacaattcttgaattggttaatcgagcaatctcaagtacaacagatt
gatgccattattgttgcaggtgatatttttgataccggcacaccgccaagttatgcccgc
gaaatgtactttgattttattgctaagctgcaccaaacatgctgtcaattagtggtgcta
gcagggaatcatgactcggttgctatgctgggtgaatcacaaaaattactgcagcaatta
tcaacaagggttatttctgcggtaagcgataatatcgcagagcaagtatttgttcttgaa
agcctaaaaactgatcaacaagcggtgatctgcgctattccttttattagggcacgcgat
attgtcaaaagctatgctgggcaatcggccagtgagaaacaacgttcgttacaacaagcc
ataacgagccattatcaaagcttatttgcccatgcacagaccttgtcagttgaaaatcaa
gctacagatactcgcttacccattattgccaccggacacttaaccacgattggtgcatcg
gttagcgagtcagtacgtgatatttatattggtactttagaagccttccctgccagcgaa
tttcccgcagccgactatatcgctttaggccatattcatcgcccacaaaaagtcactaaa
agtgagcatattcgctatagtggctcacctatcgcattaagttttgatgaagcgaataca
caaaaaagtattgttattgccgaatttaaagatggcaaactcagcgatgtagagttaact
catgtgccatgctttcaacctttggcgatggtaaaaactcagctagatacattatcggaa
gatattgctggcgttgctaaaacacaaagtactgaaccagtgaacgccaaagatgcaagt
aacacggcagatattgcagaaaaaatctggctcgatatcgaaattgaaagcgtggaatac
ttacaagatttaaccgcacgtattgagcaaatagtcgctgagttacccgtggaagtgcta
ctcgttaggcgcagtaaaaaatcccgtcagcaaatgcccagtcatgagaaaaaaataacc
ttaagcgagcttagtgtgcaagacgttttcgatgcacgcatggagatagagccttgggaa
actaatgagcagcaagcacgtaaagtgcgattaaatagtttgtacctcgaaatagcagag
caaacccaacttgccagcgctgcaaagccttctctagataaaaatagcaccatagataat
agctctgatactaaagcggagcagaaataa
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