Colwellia sp. Arc7-D: DBO93_07265
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Entry
DBO93_07265 CDS
T05422
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cola
Colwellia sp. Arc7-D
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cola03016
]
DBO93_07265
Enzymes [BR:
cola01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DBO93_07265
Transfer RNA biogenesis [BR:
cola03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DBO93_07265
Prokaryotic type
DBO93_07265
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AWB57370
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All DBs
Position
1682797..1683741
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AA seq
314 aa
AA seq
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MAKKRKGRAINGVLLLDKPYDMSSNNALQRVKHIYFAQKAGHTGALDPLATGMLPVCLGE
GTKFSQFLLDTDKTYQVTAKLGIRTTTSDVDGEVVSEKPVEVTAEQLATALATFRGTTQQ
IPSMYSALKYQGQPLYKYAREGIEVPRESRDITVFRLDLLRFEGDEVDLDIHVSKGTYIR
TIIDDLGELLGCGAHVANLRRSAVGNYPTDRMVTMTALEALLAQAEAEEVAPSVYLDPLL
LPMTTACDGIPAVFVDDMSANFLRHGNPVQCSGGPSHGLVQVFIGDDVDTGEFIGVGEID
DDGLVAPKRITVVG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaaagaaaaggccgtgctattaacggtgttttgttactcgataaaccttac
gatatgtcatctaacaatgcattgcagcgagtaaagcacatttactttgcacaaaaagca
gggcataccggtgcattagatccactcgctaccggcatgttaccggtatgtttgggcgaa
gggactaagttttctcagtttttgcttgataccgataaaacttatcaagttactgcgaaa
ttaggtattcgtaccacaaccagcgatgttgatggtgaagtggtaagcgaaaagcctgtt
gaggttacagctgagcaactcgccacagcattagcgacttttcgtggtacaacgcaacaa
atcccatcaatgtactctgcattaaagtatcaagggcaacctttatataaatatgctcgt
gaagggattgaagtaccgagagaatcacgtgatataacagtgtttaggttagatttatta
cgttttgaaggtgatgaagtcgacttagatattcatgtatctaaaggtacttatatccgc
accattatcgatgatttaggtgagcttttaggatgtggtgcacatgttgccaatcttcgt
cgcagtgctgtgggtaattatccaaccgatagaatggtgacaatgacagcgttagaggca
ttgttagcacaagcagaagctgaagaagtagctccgtcggtttatttagaccctttgcta
ttacctatgaccaccgcatgcgatggtataccagcggtatttgttgatgatatgtcagca
aattttttacgtcatggtaaccctgttcaatgttctggcggtccaagtcatggcttagta
caggtttttattggtgatgatgtcgatacaggtgagtttattggtgttggtgaaattgac
gatgatggtttagttgccccaaaacgaattacagttgttggttaa
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