Colwellia sp. Arc7-D: DBO93_07335
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Entry
DBO93_07335 CDS
T05422
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola00020
Citrate cycle (TCA cycle)
cola00190
Oxidative phosphorylation
cola00650
Butanoate metabolism
cola00720
Other carbon fixation pathways
cola01100
Metabolic pathways
cola01110
Biosynthesis of secondary metabolites
cola01120
Microbial metabolism in diverse environments
cola01200
Carbon metabolism
Module
cola_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cola_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cola_M00149
Succinate dehydrogenase, prokaryotes
cola_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DBO93_07335 (sdhB)
00650 Butanoate metabolism
DBO93_07335 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
DBO93_07335 (sdhB)
00720 Other carbon fixation pathways
DBO93_07335 (sdhB)
Enzymes [BR:
cola01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
DBO93_07335 (sdhB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_10
Fer4_18
Fer4_7
Fer4_9
Fer4_16
Fer4
Motif
Other DBs
NCBI-ProteinID:
AWB57383
LinkDB
All DBs
Position
1700302..1701012
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AA seq
236 aa
AA seq
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MKQIFSIYRYNPDVDNKPYMKDYELEIPEGSDMMVLDALILLKEQDSSLSFRRSCREGVC
GSDGLNMNGKNGLACITPLSAVPANKIVLRPLPGLPVVRDLIIDMTQFYNQYEKIRPYLI
NDGKEQPAREHLQTIEEREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYRFL
IDSRDTATEERLDDLQDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKSMLLTRAV
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaattttttcaatttaccgttacaaccctgatgttgataacaaaccttacatg
aaagattatgagctggaaattccagaaggctcagacatgatggtattagacgccttaatt
ttgctaaaagagcaagattctagtctttcattccgtcgttcatgtcgtgaaggtgtttgt
ggctctgacggtttgaatatgaatggtaaaaacggtttggcatgtatcacgcctttatct
gctgttccagcaaataaaattgtgttacgtccattaccaggtttgccagtagtacgtgat
ttgattattgatatgacacagttttacaatcaatatgaaaaaatcagaccttacctgatt
aatgatggtaaagaacaacctgcacgcgaacatttacaaactatcgaagaacgtgaaaaa
ttagatggtttatacgaatgtatattatgtgcttgttgttcaacatcttgtccttctttc
tggtggaatcctgataaatttatcgggccagcaggtttattgcacgcttatcgttttctt
atcgatagccgcgatactgcaacagaagagcgactagatgatttacaagatgcctacagc
gtattccgttgtcacggtattatgaactgtgttgatgtttgtccgaaaggattaaaccca
acaaaagccattggccatattaagtcaatgttgctaaccagagcggtttaa
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