Colwellia sp. Arc7-D: DBO93_09435
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Entry
DBO93_09435 CDS
T05422
Name
(GenBank) DUF349 domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cola
Colwellia sp. Arc7-D
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cola03400
]
DBO93_09435
DNA repair and recombination proteins [BR:
cola03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DBO93_09435
Archaeal homologous recombinant proteins
DBO93_09435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF349
HEAT_2
Motif
Other DBs
NCBI-ProteinID:
AWB57771
LinkDB
All DBs
Position
complement(2143770..2146631)
Genome browser
AA seq
953 aa
AA seq
DB search
MIFSKFLKKKWQHKNSTVRVEAINSSLSIDEPEQREIIEALAANDDNENVRRAALIKLNS
YQSWLTHSQENTMVKVKQYAGKKVCAILTDQDTIKLSEQDKLTYIKNTNDYSFFETWLKT
AEEANLIITLFEKIANKTQANDLSNKLTLKPQVLVNLFSLKQNAEVQNYIISKVYDLDTL
EKLKKKSQQPEVTQRLTDKIAKLQYAIEQPIVLCKKINLVLAKLQALKDQYDYKEYLDKR
ESLNTEWQALIAELSAFDTAENNDFIDKHQTITVQLDKLFATKAEQHVQDEIARELSDAK
QKSRIHFDKTLAIIDQTLTTSIFENDDIEEQQYQTLFDKLTSEIIASVLTKEEQNSFIAK
ICQQQQKLQQLPEIAQSVSDATHLISKVSQLAMPTTVAEMNERQTVYQDWLSEWKNAEKN
SAGALPDSIKNAANEIQRNWRQAVKPLQQVQKQEFSVTQKKLHDVKRLIASGKYNAAFGV
FKKAKQLFNALSEQQQNRIQKDYDSLSEKIADLADWEHYIATPRKQQLLADIKTIVETPL
DNPNEQAEKVKQYRKTWNSLGHADDDEEQKLNTEFNQLCETAFTPCRLFFAEQEKLRAQH
LLTRQGFMEQATLLANKLPSTTENIDQNIVVDFKTLEAELNQVVKQWQSAGQVDRAIYQE
INQQFNNVLQPVKSAIKVYHDENKEIKQQLIGTAKQLLEQDDVFKAVNQVKTLQTQWRNT
GYSGAKVENKLWQTFRKINDDIFTKRDQQSAIEKSASTAKTAELELALQTLEAQFSTINQ
LQELQDFEQALQVLYHEVTQQKPKMVKLEKQIIAKEKSLAKKIVDCKQANEKQQWRYLFT
ALEQGVASEAGFTEQGEYQHLNTFWQKKLKELTNKEQLANRADATLELEILSGIPSPSEL
QQSRMAVQVNLMQTQMSSGAPIDLEDKFSQWLMLGKFDQQDIAFLNRVKPIFQ
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgattttttctaaatttttaaaaaagaaatggcaacacaaaaatagtaccgtacgcgtt
gaagcaataaattctagtctttcaatagatgaaccagaacaacgtgaaattattgaagca
cttgccgccaatgacgacaatgaaaatgttcgacgtgctgcattaataaaactcaatagt
taccaatcttggttaacccatagccaagaaaacaccatggttaaagttaaacaatacgca
gggaaaaaagtctgcgcaattttaaccgatcaagacactattaaactctctgagcaagat
aaactcacgtatatcaaaaacacgaatgattatagtttttttgaaacatggttaaaaaca
gccgaagaagctaatttgatcatcaccttatttgaaaaaatagcgaataaaacacaggct
aatgatctcagtaataaattaaccttgaaacctcaggtgttagttaatttatttagctta
aagcagaacgcagaagtacaaaattacattatcagtaaagtttatgatttagatacttta
gaaaaacttaagaaaaaatcacaacagcctgaagttacacaacggttaactgataaaatt
gccaagctacaatacgccattgaacaaccgatcgtactttgtaaaaaaattaatttagtt
ctggcaaagttacaagctttaaaagatcaatacgattataaagaatacttagataagcgc
gaaagtttgaatacagaatggcaagcattaattgctgaattgtctgcatttgatacggca
gaaaataatgactttattgataagcaccaaactattactgtgcaacttgataaacttttt
gctacaaaagctgaacaacatgttcaggatgaaattgcgcgtgaactaagcgatgctaaa
cagaagtcacgtattcattttgacaaaacgttagctattattgatcaaacattaacaaca
agtatttttgaaaatgatgatattgaagaacaacaatatcaaacactgtttgataaatta
accagtgagataattgcttcagtattaactaaagaagaacagaattccttcattgcaaaa
atttgccaacaacagcaaaaacttcagcaattacctgaaattgcacaatcggttagtgac
gctacgcatttaatttcaaaagtatcacaattggctatgccaacaaccgttgcagaaatg
aacgaacgccaaactgtttatcaagactggcttagtgaatggaaaaatgctgagaaaaat
tcggctggagcattacctgactctattaagaacgcggctaatgaaattcagcgtaactgg
cgtcaggctgtcaagccacttcagcaagtgcaaaagcaagaattctcagtcactcagaaa
aaactacatgatgttaaaaggctcattgcatcgggtaagtacaatgctgcatttggcgtt
ttcaaaaaagctaaacaactttttaatgcgttatcagagcagcaacaaaatcgtatacaa
aaagattatgactcactcagtgaaaaaatagctgatttagccgattgggagcattacatt
gcaaccccgcgtaagcagcaactattagctgacattaaaacaattgtagaaacaccacta
gacaaccctaacgaacaagctgaaaaagttaaacagtatcgaaaaacttggaatagtctt
ggtcatgctgacgacgacgaagaacaaaaattaaataccgagtttaatcaattatgtgaa
actgcatttacgccgtgtagattgttttttgcagaacaagaaaaacttagagctcaacac
ttattaacccgtcagggttttatggagcaagcaactttactcgctaataagttaccgagt
acaactgaaaatatagaccaaaacattgtcgttgattttaagacattggaagctgaatta
aaccaagtggtaaaacaatggcaaagtgcagggcaagttgaccgtgcaatttatcaagaa
ataaaccaacagtttaataatgttttacaaccggttaaatctgcaattaaagtttatcat
gatgaaaacaaagaaataaaacagcaacttattggtactgctaagcagttacttgaacag
gacgatgtttttaaagcggttaatcaagttaaaacgttgcaaactcaatggcgtaatact
ggttattctggtgctaaagttgaaaataaactttggcaaacctttagaaaaattaatgat
gatatttttactaaacgtgatcaacagtccgcgattgaaaaatcagcaagtaccgctaaa
acagctgagttagaacttgctttacaaactcttgaagcccaattttcaactattaaccaa
ttacaagagctacaagattttgagcaagcattacaagttttataccatgaagtaacacaa
caaaagccaaaaatggtcaaacttgaaaaacaaattattgcgaaggaaaagtctttagct
aagaaaattgttgactgtaaacaagctaatgaaaaacaacaatggcgttatttatttaca
gcgttggaacaaggtgttgctagtgaagcaggttttactgagcagggtgaataccaacac
ttaaatacattctggcagaaaaaactaaaagaattaaccaacaaagaacagttggctaat
cgtgctgatgcaacgctagagcttgaaattttatctggtataccatcaccaagcgaacta
cagcaaagtagaatggcggtacaggttaatttaatgcagacccaaatgtcttctggtgcg
ccaattgatttagaggataaattttctcaatggctcatgttaggaaagtttgatcagcaa
gatattgccttcttaaatagagttaaacctatatttcaataa
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