Colwellia sp. Arc7-D: DBO93_09740
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Entry
DBO93_09740 CDS
T05422
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cola
Colwellia sp. Arc7-D
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cola03032
]
DBO93_09740
03400 DNA repair and recombination proteins [BR:
cola03400
]
DBO93_09740
Enzymes [BR:
cola01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DBO93_09740
DNA replication proteins [BR:
cola03032
]
Prokaryotic type
DNA Topoisomerases
DBO93_09740
DNA repair and recombination proteins [BR:
cola03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DBO93_09740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AWB57824
LinkDB
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Position
complement(2209169..2211898)
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AA seq
909 aa
AA seq
DB search
MTDLANNIAPVNIEDELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDFN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMSKIAHSILADLDKETVDYVPNYDGTEMIPAVMPTRIPNLLVNGTSGIAVGMAT
NIPPHNLTEVINGCLAVIENGDISFEELLELIPGPDFPTAGIISGRAGIQEAYLTGRGKI
KIRARARIEVDEKSGKETIVVFELPYQVNKARLIEKMADLVKEKRLEGISALRDESDKDG
MRMVIEVKRGEVGEVILNNLYKLTQMQVSFGLNMVALTNGQPKLFSLREMLDAFILHRRE
VVTRRTIFELRKARERAHLLEGLSIALSNIDPIIALIKNSPTPSEAKEQLLAQGWDLGLV
SDMLAAAGDDAARPEWVEEEFGIRDGQYFLTPPQAQAILDLRLHKLTGLEHEKILSEYKA
LLEVIAELLYILATPARLMEVIREELEAIRDEFGDERRTEITNASHDLSMEDLITEEDVV
VTLSHEGYVKYQILSDYQAQRRGGKGKAATKMKEEDFIERLLIANTHDTILCFSDRGKLY
WLKVFQLPLASRTARGRPIVNILPLEEGERITAILPVREYEEDKFIIMATASGTVKKTAL
TAYKNQRANGIIALNLRDDDTLIGVDITDGENDIMLFSDAGKVVRFNEKRRDSETGEIKV
DPETGEQLWALKPIGRTGTGVRGIKLEGDQKVVSLIVPKNDGPILTITENGYGKRTALDE
YPAKSRATKGVVSIKVSERNGPVVGAVQVEEQDEIMLITDNGTLVRTRVGEVSVIGRNTQ
GVRIIRTIEGEHVVALQRIDEIEEVETYELDENGEPTLTQAVEGEQVDTPESSESEGEDS
ALDNDDTQE
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttggcgaataatattgctcctgtcaatattgaggatgagctaaaaagctcc
tatttagattacgcaatgagcgttatcgtaggtcgtgcactaccagatgtgcgtgatgga
ttaaaaccagtgcatcgtcgcgtactttttgcgatgaatgttttaggtaacgactttaac
aagccgtataaaaagtcagcacgtgttgttggtgatgtaataggtaagtatcacccgcat
ggtgatacggctgtgtacgatacaattgtacgtatggcccaagacttctcattacgctat
atgctggttgatggtcaaggtaactttggttctgttgatggtgattcagcagcagcaatg
cgttataccgaaattagaatgtcgaaaatcgctcattcaattttagccgacttagataaa
gaaactgttgattacgtgcctaactacgacggtacggaaatgataccagcagttatgcca
acacgtattcctaaccttttggttaatggtacttctggtattgccgttggtatggcgaca
aacattccgccacataaccttacagaggttattaatggctgtttagcggtaatagagaat
ggcgatataagctttgaagagcttttagagttaattccaggacctgatttcccaactgcg
ggtattatcagtggtcgtgctggtatacaagaagcttatcttaccggtcgtggtaaaatt
aaaattcgtgcgcgcgctagaattgaagtcgatgaaaaatcgggtaaagaaacaattgta
gtgttcgaattgccttatcaagttaacaaagcccgtttgattgaaaaaatggctgacttg
gtaaaagaaaaacgcttagaaggcatttctgccttacgtgatgagtctgataaagacggt
atgcgtatggtaattgaagtgaaacgtggtgaagtaggcgaggttattttaaataacttg
tataagcttacccaaatgcaagtttcgtttggtttgaatatggtggcattaactaacggc
caacctaaattattcagcttacgtgaaatgcttgatgcctttatattgcatcgccgtgaa
gtagtaacacgtagaacaatctttgaattacgtaaagcacgtgaacgcgcgcatttactt
gaaggtttgtcgatagcgctttctaatattgacccgattatcgcgttaattaagaactca
ccaacacctagtgaagcgaaagagcaattactcgcacaaggttgggacttaggtcttgtt
tctgacatgctagctgctgctggtgatgatgccgctcgccctgaatgggtagaagaagag
tttggtattcgtgatggtcaatactttttaacaccaccacaagcacaagctattctagat
ttacgtttacataagttaacgggtctagaacacgaaaaaatcttaagtgaatacaaagca
ttattagaagttattgctgaattactttatattttagcgacacctgcacgtttaatggaa
gttattcgagaagagcttgaagctattcgtgatgaatttggtgatgagcgtcgtactgaa
ataactaatgcttcacatgatttatcaatggaagacttaatcactgaagaagatgtagtg
gtaacactttcacatgaaggttatgttaagtatcaaatattaagtgattatcaagcgcaa
cgccgtggtggtaaaggtaaagccgcaactaagatgaaagaagaagatttcattgagcgt
ttacttattgctaatacccacgataccattttatgtttctcagaccgcggtaaactttat
tggttgaaagtattccagttacctttagctagtagaacagcacgtggacgaccaatagta
aatattttaccgcttgaagagggtgaacgtattactgctattttaccggtacgtgaatat
gaagaagataaatttataatcatggctactgcttctggtactgttaagaaaactgcttta
acagcttataaaaaccaacgagctaacggtattattgccttaaacttgcgtgatgacgat
accttaattggtgttgatattaccgatggtgagaatgacattatgttgttctcagatgca
ggtaaagttgtacgttttaacgaaaagagacgcgatagcgaaacaggcgaaataaaagtt
gacccagaaacgggtgagcaattatgggctttaaaaccgattggacgtacaggtaccggt
gttcgtggtattaagttagagggcgatcagaaggttgtatctttaattgtaccgaaaaac
gatggaccaatattaaccattactgaaaatggttacggtaagcgcacagcgttggatgaa
taccctgcgaaaagtcgagcgactaaaggtgttgtttcaattaaagtaagcgaacgtaac
gggccagtagttggtgcagttcaagttgaagaacaagacgaaataatgttgatcaccgat
aacggtacgctagttcgtactcgtgtaggcgaagttagcgttattggtcgtaatactcaa
ggtgttcgtattattcgtactattgaaggggaacatgttgttgccttacaacgtattgat
gaaattgaagaagttgaaacttacgaactagacgagaatggtgagcctacgttgactcaa
gcagtagagggtgagcaagttgatacacctgaatctagcgagagtgaaggtgaagattca
gcactcgataatgacgatactcaagagtaa
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