Colwellia sp. Arc7-D: DBO93_12870
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Entry
DBO93_12870 CDS
T05422
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DBO93_12870 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cola02000
]
DBO93_12870 (msbA)
Enzymes [BR:
cola01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
DBO93_12870 (msbA)
Transporters [BR:
cola02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DBO93_12870 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
nSTAND3
AAA_22
DEAD
PixA
MMR_HSR1
RMNT_CmcI
AAA_29
RsgA_GTPase
AAA_16
Zeta_toxin
DUF87
APS_kinase
AAA_15
nSTAND1
BCD
Ribophorin_II_C
Motif
Other DBs
NCBI-ProteinID:
AWB58367
LinkDB
All DBs
Position
complement(2964087..2965850)
Genome browser
AA seq
587 aa
AA seq
DB search
MSTKPPQETTEDTTRKNFKRLLGYAKAYKAAAVVSILGMLGYAAIDSFVFSQLQPLIDKG
LDGQDTEFMKWAPYVIVVMFILRGICHFAGNYTLAWLGNNVVANIRQELFEHVMSMPVAY
HDKESTGSLISKLTFDTEQVLSAVSKALLTLVQQGAFVIGLLIVMFYNSWQLASIFLLIT
PVIAGIVTVVSGRFRKISKGIQNAMGEVTTAAEQTFNGHKVVLTFDGQQREFDRFSKINK
HNRQQRMKMVATQAASVPIIQIIASFALAFVLYVANLDSMRANISAGVFMTVLMCMVTLL
RPLKLLTTVNSEFQKGMAACVSIFGVLDQKTEHDTGTISLERAKGTLAFEHVNFFYNAEK
EKQALTDLSFTANVGETVALVGRSGSGKSTASSLLLRFYNATSGKVLIDGQDIKDYKLKD
LRKQFAYVSQQVVLFNDSIANNIAYGKPQATREEIEDAARKAHVMEFVDALPEGLDTNIG
DNGAMLSGGQRQRVAIARALLCDAPFLILDEATSALDTESERHIQDALSILQQNRTCIVI
AHRLSTIESADKIIVMEQGQIKEQGDHKTLLALDGAYAQLHKFQFGA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaaaaccaccacaagaaactactgaagatactacgcgaaaaaacttcaagcgc
ctattgggctatgccaaagcttataaagcggctgcggttgtatccattctaggtatgcta
ggttatgccgctatcgacagtttcgtgttctcacaattgcagcctttaattgataagggc
ttagacggtcaagatactgagtttatgaagtgggcgccttatgtcatcgtagtgatgttt
attttacgtggtatttgtcactttgcgggtaactataccttagcttggttgggtaacaat
gttgtcgctaatattcgtcaggaattatttgaacatgtaatgtctatgccggttgcttat
catgataaagaatcaacggggagcttgatttcaaaattaacctttgataccgaacaagtc
cttagtgctgtttctaaagccttattaaccttggttcagcaaggtgcttttgtaataggt
ttactgattgttatgttttataacagttggcagttagcgtcgatattcttacttattacg
ccagttattgctggcatagtaaccgtggtttcaggtcgctttcgtaaaataagcaaaggc
attcaaaatgccatgggtgaagtaacaacagcggctgagcaaacttttaatggccataaa
gtggttctaacctttgatggccaacaacgagagttcgatcgtttctctaaaattaataaa
cataatcgtcaacagcggatgaaaatggtagcaactcaggcggctagcgtacctattata
caaattattgcctcgtttgctttagcgtttgttttgtatgttgccaatttagattcaatg
cgcgccaatatctcggccggtgtttttatgacggtactgatgtgtatggtaacgctactt
cgtcctttaaaacttttgactacagtgaatagtgaatttcaaaaagggatggcggcttgt
gtgagcatttttggcgtgcttgatcaaaaaacagaacatgacacgggcactatttctcta
gagcgagcaaaaggcactctagcgtttgaacacgtaaatttcttttataacgctgaaaaa
gaaaaacaagcacttaccgatttaagctttacggcaaatgtgggtgaaaccgtcgcttta
gttgggcgttctggtagcggtaaatcaacggcaagttcattattgttacgattttataat
gcaacatcaggcaaagtattaattgatggccaagatattaaagattacaagctgaaagat
ttacgtaagcagtttgcttatgtttctcaacaagttgtactttttaatgattctattgcc
aacaatatcgcttacggaaaaccccaagcaacccgcgaagaaattgaagatgccgcgcgt
aaggctcatgtcatggagtttgttgatgctttacctgaagggcttgatacaaatattggt
gataatggcgctatgctttcaggtggacagcgtcaacgtgtggctatagcgcgagcattg
ctgtgtgatgcgccatttttaattttagatgaagcaactagcgcgttagatactgaatct
gagcgtcatattcaagatgctttgagtatattgcaacaaaatcgcacctgtattgttatt
gcccatcgtttatcgactatagaaagtgccgataaaattattgtgatggagcaaggtcaa
attaaagagcagggtgatcacaaaacattattagcgctagatggtgcttatgcccagtta
cataaatttcaatttggtgcttag
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