Colwellia sp. Arc7-D: DBO93_13915
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Entry
DBO93_13915 CDS
T05422
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DBO93_13915 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cola03400
]
DBO93_13915 (mutS)
DNA repair and recombination proteins [BR:
cola03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DBO93_13915 (mutS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AWB58544
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Position
3220064..3222625
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AA seq
853 aa
AA seq
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MNESELSKHTPMMRQYLTIKAEFPNILIFYRMGDFYELFFDDAKKASDLIDISLTARGKT
GGNAIPMAGVPYHAVDGYLAKLVKLGESVAICEQIGDPATSKGPVERKVVRVVTPGTVSD
EALLSDRQDNLIVAIHQTSQGFGLAYLDMTSGRFVLVEPRTEEQVQAELQRLSPAELLYP
ESLAANSVIAGRKGLRRRPDWEFDLETSKTLLNKQFGTQSLSGFGVEDKPLGIAAAGCLF
QYVKDSQRIALPHIRSIIGESASSAVILDAATRRNLELTQNLQGGNENTLAAILDKAATP
MGSRLLKRWLHFPLRELEVLNNRQSAIEDILQQDLSFELNTNLKQFGDIERIVARIALRS
ARPRDFARLRNALIHLPELQTLTTSCSQIHLAALIKQCQPIPTIQALLESAIVENPPVLI
RDGGVIAAGYNAELDVLRDLSDGATEFLAQLEAREKERTGIQSLKVGYNKVHGFYIEMSR
SSAIDVPDDYIRRQTLKNNERFITNELKQHEEKVLSAQSKFLALEKRLYDALFDQILPEL
EKLQLLAQSLSEIDVLNTFAERAETLNYVKPILQADSGINIEAGRHAVVEQMTTEPFIAN
PVILNNRREMLIITGPNMGGKSTYMRQTALIVLLAHIGCYVPASAATIGMVDRIFTRIGA
SDDLASGRSTFMVEMTETANILHNATNKSLVLLDEIGRGTSTYDGLSLAWACAEMLAIKT
KAFTLFASHYFELTLLADQIETLANVHLDAVEHGDSIVFMHSVQEGAASKSFGLQVAQLA
GVPRSVIQRAKQRLAELESMQAPSIMTNEPKAFEQLSLMDNKHPVVEELSEIDVNDLSPK
MALDLLYKLKGLL
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatcagaactttctaaacacacccctatgatgcgtcagtacctgacaattaaa
gccgaattccctaatattttaattttttatcgtatgggcgatttttatgagctgtttttt
gacgatgctaaaaaagcatctgatttaatcgatatttcattaactgcgcgaggaaaaacc
ggtggcaatgctattccaatggctggtgtcccctatcatgcggttgacggttatttagct
aaattagtcaagctaggtgagtctgtcgctatttgtgagcaaataggtgatcccgcgaca
agtaaaggtccagtcgaacgtaaagttgtacgtgttgtaacccctggtacggttagtgat
gaagccctgttaagcgatcgacaagacaatttaattgtggcaattcatcaaacatcacag
ggttttggtctcgcttatttagacatgactagtggacgatttgtattagtagagccaaga
actgaagagcaagtgcaagcagaacttcagcgattatcgccagctgaattactctatcca
gaatctttagctgccaacagtgtcattgctggtcgcaaaggtttacgacgacgccctgat
tgggagtttgatttagaaaccagtaaaaccctgctaaataaacaatttggtactcagtca
ctgtcaggttttggtgttgaagataaacctttaggtattgcggcagcaggctgcttattt
cagtatgtaaaagatagccagcgtattgcattgccacatattagatcaattattggtgaa
agcgcctcaagtgccgttatcctcgacgctgcgactcgtcgcaatttagaattaacgcaa
aacttacaaggtggcaacgaaaacaccttagctgcaattcttgataaagcagctacacct
atgggttcaaggttactaaagcgatggttgcattttcctctacgcgaacttgaagttttg
aataatcgccagagtgcaattgaagatatattacagcaagacttatcgtttgagctcaac
actaacttaaaacaatttggtgatattgaacgcatcgtggcacgtatcgctttgcgctct
gctcgccctcgtgattttgcacgtttgcgtaatgcattaatacatttgcctgaactacag
acacttactacaagctgctcacaaatacacttagctgcattgattaagcaatgtcagcct
attcctacaatacaagcattattagaaagtgccattgtagaaaatccgcctgtacttatt
cgtgacggcggcgttatcgctgctggctataatgccgaattagacgtattgcgagactta
agcgatggggcaacagaatttttagcacaactagaagcacgtgaaaaagagcgtacgggt
attcaatcattaaaagttggctacaataaagtacatggtttttatatcgaaatgagtcgc
agttcagcaattgatgtacccgatgattatattcgacgacaaacgttaaagaataacgaa
cgctttattactaacgaattaaaacagcatgaagagaaagtgctctcagcgcaaagtaag
tttctggcgcttgaaaaacgcctatatgatgccttatttgatcaaatactgcctgagtta
gagaaactgcaactgctagcgcaatcgctgtctgagattgatgtattaaatacttttgcc
gaacgtgcagaaactttaaattatgtaaaaccaatattacaagcagatagcggtattaat
atagaggcaggtcgacatgcggttgttgaacaaatgaccacagaaccttttatcgccaac
ccagtgatattaaataaccgtcgtgagatgttgattattacaggtcctaacatgggcggt
aaatcgacttatatgcgccaaactgcattaatcgttctactggcacacataggttgttat
gtaccggctagtgctgcaactataggtatggttgatagaattttcacccgtatcggtgct
tctgatgacttagccagcggtcgctctaccttcatggtagagatgactgaaacagccaat
attttacataatgccaccaataaaagtttagtcttattagatgaaattggccgaggaacc
agcacctatgacggtttatcactcgcttgggcttgtgctgaaatgctggcgatcaaaact
aaggcctttacgctttttgctagccactattttgaattgactttacttgccgatcaaatt
gagacactcgcaaatgttcatctagatgctgttgaacatggggacagtattgttttcatg
cactcagtacaagaaggcgctgcaagcaaaagctttggcttacaagttgctcaacttgct
ggcgttccaagaagtgttattcaacgagcaaaacaacgcttagctgagcttgaaagcatg
caagctccttctattatgactaacgaacccaaagcatttgaacagttatctttaatggat
aataaacaccctgtagtcgaagagttgagtgaaatagatgttaacgatttaagccctaaa
atggccttagatttactgtataagttaaaaggcttactgtaa
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