Colwellia sp. Arc7-D: DBO93_15005
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Entry
DBO93_15005 CDS
T05422
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DBO93_15005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cola03019
]
DBO93_15005
03009 Ribosome biogenesis [BR:
cola03009
]
DBO93_15005
03036 Chromosome and associated proteins [BR:
cola03036
]
DBO93_15005
Enzymes [BR:
cola01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DBO93_15005
Messenger RNA biogenesis [BR:
cola03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DBO93_15005
Ribosome biogenesis [BR:
cola03009
]
Eukaryotic type
90S particles
RNase
DBO93_15005
Prokaryotic type
rRNA processing factors
DBO93_15005
Chromosome and associated proteins [BR:
cola03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DBO93_15005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AWB59585
LinkDB
All DBs
Position
complement(3487544..3488212)
Genome browser
AA seq
222 aa
AA seq
DB search
MARLSKKIGYSFKEPKLLVQALTHRSAKGAHNERLEFLGDSILGFVIAESLFQKFPKQAE
GDLTRMRSSLVKGVTLAEVGRAFDLGQYLILGPGELKSGGHRRDSILEDAIEAILGAVYL
DSDLPTCQALILSWFEQRLADIKPGNEQKDPKTRLQEYLQGRKIPLPQYDVINTTGQSHN
QQFTVRCTTSVLENEVITKGTSRRKAEQSAALKVLTLIEKAK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
attgcgcggctatcaaaaaaaattggttacagttttaaagagccaaaattactagttcaa
gcgttaacacacagaagtgctaaaggtgctcataatgagcgattggagttcttaggtgac
tcgattttaggttttgttattgctgagtctttgtttcaaaagtttccaaagcaagccgag
ggcgatttaacacgtatgcgctcaagcttagtaaaaggagtcactttagctgaagttgga
cgtgcattcgatttaggtcaatacttgatattgggtcctggcgaacttaaaagtggtggt
catagacgagactctatacttgaagatgctattgaagctattttaggcgcagtttactta
gattcagatttaccaacttgtcaggcacttattcttagttggtttgaacagcgcttagcc
gatataaaacccggcaatgaacaaaaagacccaaaaacacgtttacaagaatacttgcag
ggacgaaaaattcctttgccgcaatatgatgtaattaataccacagggcaatcacacaat
cagcaatttacggtgcgctgcacaaccagtgtacttgaaaatgaagtgattactaaaggc
actagccgacgtaaagctgagcaatcagctgctttgaaggtgctaacattaatcgaaaaa
gctaagtag
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