Colwellia sp. Arc7-D: DBO93_15820
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Entry
DBO93_15820 CDS
T05422
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cola
Colwellia sp. Arc7-D
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cola03009
]
DBO93_15820
Enzymes [BR:
cola01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
DBO93_15820
Ribosome biogenesis [BR:
cola03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DBO93_15820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
CCM2_C
Motif
Other DBs
NCBI-ProteinID:
AWB58880
LinkDB
All DBs
Position
complement(3667756..3668487)
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AA seq
243 aa
AA seq
DB search
MALNKARLDRYLAQHCQVSRKRVRLILAQNRVLINGEIAHDADEIIDTFSHIIFDGQVIQ
DNPPYYIMLNKPIGVVSATRDTQHKTVIDLLSCSYKSELHIVGRLDLNTSGLVLMTNDSR
WSERLTLPEKKVTKRYMVTLKNKLDEEYVQAFAKGMYFAFEDITTKPAKLTIISDYQAQV
ELIEGRYHQIKRMFGRFRNPVMALHRCAIGNLALDNNLAAGESRELTKLEVAGIDRGSTV
FDL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtggcattaaataaggcgaggctagatcgatatttagctcaacattgccaagtcagtcgc
aaaagagtgcgattgattttggcacaaaatagggtgttgattaacggcgaaattgctcat
gacgctgatgaaataatcgatacctttagccacataatatttgatggtcaggtaatccaa
gataaccctccctattatattatgcttaataagccaataggtgtggtaagtgctacccgt
gatactcagcataaaacagtgattgatttacttagctgctcttacaaaagcgaactgcat
attgttggtcgtcttgatttaaatacttcaggtttagtattaatgacgaacgatagccgt
tggtctgaacgtttaaccttacctgagaagaaagtaaccaagcgctatatggtgacgtta
aaaaataaacttgatgaagagtacgtgcaggcgtttgccaaggggatgtactttgctttt
gaagatataaccacgaagccggcaaagttaaccataatttctgactatcaagcacaagtt
gagcttattgaagggcgttatcatcaaattaaacgcatgtttggtcgttttcgcaaccct
gtaatggctctgcatcgatgcgctatcggaaacttagcacttgataacaacctagcggca
ggagaaagtagagagctgacaaagttggaagttgcaggtattgatagaggtagcacagta
tttgatttgtaa
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