Colwellia sp. Arc7-D: DBO93_15895
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Entry
DBO93_15895 CDS
T05422
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DBO93_15895 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cola02000
]
DBO93_15895 (lptF)
Transporters [BR:
cola02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
DBO93_15895 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
DUF1129
MASE7
Motif
Other DBs
NCBI-ProteinID:
AWB58892
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Position
complement(3682666..3683790)
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AA seq
374 aa
AA seq
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MIIFRYLLKEVAKTQLAVFLVIMTIFISNKFVRVLDDASEGGIPGHLVMTFIGLKIPDLA
GMILPLSFFLGVLLAYGRIYADNEMTVLHACGVSEWYVVRVTLILGFVTAIVTGIFTLYL
SPMAAEYEYQVKDQIAADSGLSSLIAGRFQATGNKKAVVFIHDKNRDDNTFEKVFVAQLP
DEDTPNSSVIDSSLVYAATGQVVEEETGLQRLILSAGTRYQNDIKNKEFRQVTFDKYYIQ
IQDQKVEHKRRKLSAIPTDDLYQETTPEASAESQWRIAFPLACIIMTLVAVPLSVVNPRQ
GKFGKMLPALLLFLSYFLLLTAVRSGIEKGSVAQYIGLWPVHFVVLILGFSLLVKGRASG
RKFKAKLVNNKGAS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgattatatttcgttatttactcaaagaagttgccaaaactcagcttgctgtatttctt
gtcatcatgacaatatttatcagcaataaatttgtgcgcgtacttgatgacgcctcggaa
ggaggtattccaggtcatttagtgatgacctttattggtctgaaaatccccgatttggct
ggcatgattttaccgctgagcttttttctcggcgttttattggcttatggtcggatttac
gctgataacgaaatgacagtgctgcatgcttgtggtgtcagtgaatggtatgtggtgcgt
gtgacgctaatattgggttttgtaacggccatagttacgggcatatttacgctgtacttg
tcacccatggctgctgagtatgaatatcaagttaaagatcaaattgcagctgactcagga
ttaagctcgcttattgctgggcgatttcaagctacaggtaataaaaaagcggtggtcttt
atccatgataaaaatagagatgacaatacttttgaaaaagtatttgttgctcaacttcct
gatgaagatacgccaaactcaagtgttattgactcaagcctcgtttatgcggctacagga
caagtcgttgaagaagaaacaggcttacaacgcttgatactctctgcaggtacgcgatat
caaaacgatattaaaaataaagagtttcgacaagttacttttgataaatactatattcaa
attcaagatcagaaagttgagcataaacgccgtaaattaagtgcaatacctactgatgat
ctataccaagaaactacgcctgaagcgagcgctgaaagccagtggcgaattgcctttcca
ttggcctgtattatcatgactttggtcgcggtaccgttaagcgtagttaatccacgccaa
ggtaaatttggtaaaatgctacctgcgctcttactttttttaagttatttcttattgtta
acggcagttcgctcaggcatagaaaaaggctctgttgcgcaatatatagggttatggccc
gtgcattttgtggtgctgatattaggttttagtctattggttaaaggtcgcgcgagcgga
cgtaaatttaaagcaaaactagtcaacaataaaggggcttcttaa
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