Colwellia sp. Arc7-D: DBO93_18225
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Entry
DBO93_18225 CDS
T05422
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
cola
Colwellia sp. Arc7-D
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cola03021
]
DBO93_18225 (rpoH)
Transcription machinery [BR:
cola03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DBO93_18225 (rpoH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AWB59307
LinkDB
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Position
complement(4195887..4196750)
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AA seq
287 aa
AA seq
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MSESMQSMALTVPKSGSIEAYVQSSYSIPMLTAEKEHELATRLYSENDLKAAQELIMSHL
RFVIHVAKGYAGYGLPQADLIQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEFVL
KNWRIVKVATTKAQRKLFFNLRKNKKRLGWFSHEEVSNVAETLGVTTKDVLEMESRMSNQ
DQAFELSTDDDDNASASTYSPAQYLEDKQSDLATEVEDSNWEQHANKRLSNALVGLDDRS
QDIIRTRWLLDDKSTLQELANKYEISAERVRQLEKNALAKLKGAMAT
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatcaatgcaatcaatggcgttaactgttcctaaaagtggcagcattgaagca
tacgtgcaatcttcgtatagcattccaatgctgacggcggaaaaagagcatgagttagca
actcgtttatattctgaaaatgatttaaaagcggcacaagaattaattatgtcgcatctt
cgttttgttattcatgttgctaagggctatgcaggctacggcttaccacaagctgattta
attcaggaaggtaatatcggactgatgaaagcggtaaaacgttttaatcctgaagttggt
gttcgcctagtatcttttgctgtgcactggattaaagctgaaattcatgagtttgtacta
aaaaactggcgcatagttaaagttgctacaactaaagcacaacgaaaattattttttaac
ttacgtaaaaataaaaagcgtttaggttggtttagtcatgaagaagttagtaacgtagct
gaaacacttggtgttacgactaaagatgttttggaaatggaatctcgtatgagtaaccag
gaccaagcctttgagttatcaactgacgatgatgataacgctagtgcaagcacatattct
ccagcgcaatatctagaagataagcaatctgatcttgctacagaagtagaagattcgaac
tgggagcaacatgctaataaaaggctaagtaatgccttagttggtcttgacgatcgcagc
caagatattattcgtactcgttggttacttgatgataagtcaactttacaagagttagcg
aataaatatgaaatatcagctgaacgtgttcgccaattagagaaaaatgcactggctaaa
ttaaaaggtgcaatggctacatag
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