Collinsella sp. zg1085: KPC83_00015
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Entry
KPC83_00015 CDS
T09607
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
coll
Collinsella sp. zg1085
Pathway
coll03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KPC83_00015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coll03400
]
KPC83_00015 (recF)
DNA repair and recombination proteins [BR:
coll03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KPC83_00015 (recF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA_27
DUF2813
AAA_16
ABC_tran
Glyco_transf_34
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
QWT17605
UniProt:
A0A975SDB2
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Position
3089..4192
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AA seq
367 aa
AA seq
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MPLYARELRVHNFRSYVDMSLELNSGLTILVGHNAAGKTNLVEALQLLTAGQSFRKPSPS
ELINEDASSADIRLELIGDGRHLDLGLEISPERRRFLKNGKYVKTQGIRGILPSVLFCPD
HLDMIKRSASTRRETLDDFGCQLNQSYAQLVSTYKRGLEQRNKLLRNEYLDHGLLEAWNE
SIVQSGAALIQHRTALLQRIEQYMHVVYAYIAPSETMQIRYRNSFLDTDDTHQYTREELI
EHFYQALVQTHTDELRRGLTLVGPHKDEIEISINGRLARSFGSQGQQRSLVLAWKIAELE
VTKDILGYSPLLLLDDVMSELDEKRRSALAHFIQDEVQTVITTTNLGYFQTSILERAQVV
NISHDNS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgccgctttatgcgcgcgagctgcgggtgcataactttcgtagttatgtagatatgagc
cttgagctaaactcagggctcactatcttagttggacataacgctgctggtaaaactaat
ctagtagaagcacttcaactcttaaccgcggggcagtcatttcgcaaaccaagcccgtct
gaattgattaacgaagatgcaagcagtgcagatatacgcctagagcttatcggcgatgga
cgccatctcgacctagggcttgagataagccctgagcgccgacgctttctaaaaaatggc
aagtatgtcaaaactcaaggcatacgcggaatactaccaagtgtgcttttttgccctgac
cacctcgacatgattaagaggtcagcctcaacacgtcgtgaaactcttgatgattttggt
tgtcagcttaatcaatcatatgcgcagcttgtttcaacatataaacgtggtcttgagcag
cgtaataagttgttacgcaacgagtatcttgaccatgggctccttgaggcatggaatgaa
agtattgtgcaatctggtgcagctcttattcagcatagaacagcgcttttgcaacgtatt
gaacaatatatgcacgtagtgtatgcctatattgctccttctgaaactatgcaaattcgc
tatcgcaatagttttttagatacagacgatactcatcaatacactcgtgaagagttgatt
gagcacttttatcaagcgcttgtacaaacacatactgatgagcttcgtcgtgggcttacc
ctagtggggccgcataaggacgaaatagaaatctcaattaatgggaggctcgcacgctca
tttggaagccaaggacaacagcgttctttagtgcttgcctggaaaattgctgagcttgaa
gttacaaaagatattcttggatatagtcctcttttactgctcgatgatgtaatgagtgaa
cttgatgaaaagcgccgctcagcacttgcacattttattcaagatgaagtgcagacggtt
ataacaacaaccaaccttgggtattttcagacatctattcttgaacgggcacaggtggtg
aatatctcccatgacaactcatga
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