Collinsella sp. zg1085: KPC83_01665
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Entry
KPC83_01665 CDS
T09607
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
coll
Collinsella sp. zg1085
Pathway
coll03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
coll00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KPC83_01665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
coll03021
]
KPC83_01665
03400 DNA repair and recombination proteins [BR:
coll03400
]
KPC83_01665
Enzymes [BR:
coll01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KPC83_01665
Transcription machinery [BR:
coll03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KPC83_01665
DNA repair and recombination proteins [BR:
coll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KPC83_01665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
QWT17886
UniProt:
A0A975SDT6
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All DBs
Position
413100..414041
Genome browser
AA seq
313 aa
AA seq
DB search
MSEFIRPQVQVEEISDTCARVSVEPLERGYGDTLGNSLRRVLLSSLEGAAAEAIQIDGAQ
HEFMALDNMVEDVTDIVLNVKGLVFRSLGTTNEATATISMNGPCEVTGADFFIPSEFELV
NPDQHIATLTEGGHLTMTMRIGYGRGYVSADANKRDNDPIGIIHVDSLYSPVYRCAKLVE
ACRVGQHTDYDRLVLEIETNGALSPRDAVVQAANIINQHMAAFMNLADIPEEEEEISIFA
PEQTTDNAELDKQIEDLDLSVRSYNCLKRASIHSVRQLVEFSENDLLNIRNFGVKSIEEV
KDKLETMGLGLKA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaattcattagaccccaggttcaggtcgaagagattagtgacacctgtgcccgt
gtatccgttgagccgcttgagcgtggttatggcgatacgcttggtaattccctgcgtcgc
gtccttttgtcatcgctcgagggtgctgctgctgaggctattcagattgacggcgctcag
catgagtttatggccttggataacatggttgaagatgttaccgatatcgttctgaatgtt
aagggtctggtgttccgttcgctcggcaccactaacgaggccactgctaccatctctatg
aatggtccttgtgaggttactggtgcagatttcttcatcccttcggagtttgagcttgta
aatcctgatcagcatattgctacccttaccgagggcggccatctcacgatgactatgcgt
atcggatatggtcgtggctatgtatctgctgacgctaacaagcgtgacaacgatcctatt
ggcatcattcacgtagactcactgtactcgccggtatatcgctgcgccaagcttgtagag
gcgtgtcgtgttggtcagcacactgactacgatcgcttggtgcttgagattgagaccaac
ggtgctttgtctccgcgtgatgcggtagttcaggctgccaatatcattaatcagcacatg
gctgcattcatgaatcttgccgatattcctgaggaagaggaagagatttcaatctttgcg
cctgagcagactactgataacgctgagcttgataagcagattgaagacttggatctttca
gttcgttcttataactgcctaaagcgtgcaagtattcattcagtgcgtcagctggttgag
ttctctgagaacgacctgctcaatatccgcaacttcggcgtgaagtcgattgaggaagtc
aaagacaagcttgaaaccatgggcctgggcctgaaggcttaa
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