Collinsella sp. zg1085: KPC83_02725
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Entry
KPC83_02725 CDS
T09607
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
coll
Collinsella sp. zg1085
Brite
KEGG Orthology (KO) [BR:
coll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
coll03000
]
KPC83_02725
Transcription factors [BR:
coll03000
]
Prokaryotic type
Helix-turn-helix
LacI family
KPC83_02725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
TetR_N
HTH_23
MarR_2
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QWT18064
UniProt:
A0A975SE66
LinkDB
All DBs
Position
656417..657439
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AA seq
340 aa
AA seq
DB search
MKAKVTIEQIATAAGVSSATVSRAINHPELVNSATRTLISTTMQEFKYEPPSTARRQSYG
TSKGLIAIEIPWLDNPFYAEIIRGMQVAARSKGYDTCIIWSRLEQEGSDSLYNQLSYLGV
SGILVVSPLDAQTLERLKSIAPVVQCCEFNPDSSVPYVSIDDFASAAKATEHLIACGCTS
LGILRGPSSFKYARERYRAFKQVLEQNGIEIHPEWIRKIPDNSFGLAYAEACNLFASKHI
PEGIFCCSDVFGAAVLGAAHKYHIMVPDDLMIIGFDNVSMSEMVTPPLTTVNQPRYRMGA
TACSMVIEQIKGKHSSGSVVLDTELIVRETTLARKSTRSE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagctaaggtaactattgagcaaattgctacagctgctggcgtgtcttctgcgacc
gtttcacgtgcaatcaatcatccagaacttgttaacagcgcaacgagaacgcttatttca
accactatgcaggagttcaaatatgagcctccaagcaccgcacgaagacaaagctatgga
acttcaaaaggacttatcgctatagagattccttggcttgataatccattttatgcagaa
attattcgcggcatgcaagttgcagcgcgctcaaaaggatatgatacctgcattatctgg
tcacgccttgagcaagaggggtcagattcgctctataaccagctttcctatctaggtgtt
tctggcattttggtagtttctcctcttgatgcgcagacacttgaacgactgaaaagcatt
gctcctgttgtgcagtgctgtgagtttaatccagacagctcagttccgtacgtctcaatt
gatgactttgcatctgccgctaaagcaactgagcacttgattgcttgcggctgcacaagt
ttaggtatcttgcgcggaccttcttcttttaagtatgctcgcgaacgttatcgcgctttt
aagcaagttcttgaacaaaatggcattgagattcacccagaatggattagaaaaattcct
gataactcttttggtcttgcctatgctgaggcgtgtaatctttttgcatcaaaacacatt
cctgaaggtattttttgctgttcagatgtctttggtgccgcagtgcttggcgctgctcac
aagtatcacattatggtgcccgacgaccttatgattattggctttgataacgtgagcatg
tcggagatggttaccccaccgcttaccactgttaatcagccacgatatcgtatgggcgca
actgcctgctcgatggttattgaacaaataaaaggtaagcactcaagtggtagtgttgtg
cttgatactgagcttattgtccgtgaaaccacccttgcaagaaaaagcacgcgtagcgag
tag
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