Collinsella sp. zg1085: KPC83_03625
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Entry
KPC83_03625 CDS
T09607
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
coll
Collinsella sp. zg1085
Brite
KEGG Orthology (KO) [BR:
coll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
coll03016
]
KPC83_03625 (truB)
Enzymes [BR:
coll01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KPC83_03625 (truB)
Transfer RNA biogenesis [BR:
coll03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KPC83_03625 (truB)
Prokaryotic type
KPC83_03625 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QWT16961
UniProt:
A0A975SCE4
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All DBs
Position
871807..872757
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AA seq
316 aa
AA seq
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MAKKSVVSPINALVAVDKPLHMSSHDVVANARRSLSIRRIGHAGTLDPAATGVMILGIGQ
ATRLLGQITLDKKSYVAQISFGIQTTTDDAEGDVVLRAPVPDVLSSFDYAARFVSGLVGT
SKQVPPVYSAISIDGVRAYRRARQGEKLELSPRPIEIFDAQLINISPAGAEHALTWTLAL
TVSKGTYIRALARDIGRNLGSAAHISALQRTASGSISLDVALSLDRLSVDTVKTHALNPL
AVLNIPSFDVNEAQLIDVHVGRSLTDLSDCPVGRIGLTCAGQLHALAAYDGKHCVMETVF
PQALDGCDEHRLREGR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaatctgtagtttcgcccatcaacgctttggtggctgttgataaaccgctg
catatgagttcgcatgatgtcgttgccaatgcacggcgctccttgtcgattcggcgtatt
gggcacgcaggaactctcgatccagcggcaacaggcgtcatgattttgggcattgggcag
gctacacgcttgcttggtcaaattaccctcgacaaaaaaagctatgtggcacaaattagc
tttggcatacaaaccacaacagatgatgcagaaggtgacgtagtgctgcgcgctcctgtg
cctgatgtgctttcaagttttgattatgcagctcgctttgtttctggtcttgttggtaca
tctaagcaggtaccaccggtgtactcagccatctcgatagatggcgtgcgtgcatatcgg
cgagcacgccaaggtgaaaagcttgagctttcgccacgtccgattgagatttttgatgct
cagctcatcaatatctcacctgctggagcagaacacgcacttacttggacgctcgcgctt
accgtaagtaagggaacctacatacgcgcacttgccagagacatagggcgcaatttaggg
agtgcagctcatatctcggcacttcaaagaaccgcttcaggttcgattagcttagatgtg
gcgctttcgcttgataggctcagtgttgatacggttaaaacacatgcgctcaatccgtta
gctgtgcttaatattccaagctttgatgtgaatgaagcgcagctcattgatgttcatgtt
ggccgttcactcaccgatttatctgattgtcccgtgggtagaattgggcttacctgtgca
ggccagctgcatgcacttgcagcatacgatggtaagcactgtgttatggaaacggtattt
ccgcaagccttagatggctgtgatgaacatagactgagagagggtcggtag
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