Collinsella sp. zg1085: KPC83_03710
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Entry
KPC83_03710 CDS
T09607
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
coll
Collinsella sp. zg1085
Pathway
coll03030
DNA replication
coll03430
Mismatch repair
coll03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KPC83_03710 (holA)
03430 Mismatch repair
KPC83_03710 (holA)
03440 Homologous recombination
KPC83_03710 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coll03032
]
KPC83_03710 (holA)
03400 DNA repair and recombination proteins [BR:
coll03400
]
KPC83_03710 (holA)
Enzymes [BR:
coll01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KPC83_03710 (holA)
DNA replication proteins [BR:
coll03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KPC83_03710 (holA)
DNA repair and recombination proteins [BR:
coll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KPC83_03710 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HK_RR_C
Motif
Other DBs
NCBI-ProteinID:
QWT18280
LinkDB
All DBs
Position
889047..890018
Genome browser
AA seq
323 aa
AA seq
DB search
MASDALLPAYLVLGTNELKRQRVIAKMKARLEASGMLDFNLDERELSADTPIDDIVSSLN
TFPMGADFRLVILYGCDRLPKTISEPLIDYLASPAATTVCLLVAGSLAKNTRLYKAIAAL
GKQAILDCSPTKAYELPRLAIKQMQGLYQKQLDMSAAQELITRIGDDERLLATTLERLAQ
QVNVPQVSKHDIERLVARTAEAQPWPFLDAVSARDAKQAMLLLRRMPQGSEVYLQSLVVR
RLRELLIAQCLDERRESGSLSKRLGRQDWQVKHHIHWARGFSHDELINALRTAADLEQTL
KGSGDSALAFELWVMNICTKQSV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtggcatcagatgctttgcttccagcttatttagtgcttggaaccaacgaattaaagcgc
cagcgtgtaattgcaaagatgaaagcacgtttagaggcaagcggtatgcttgatttcaat
ctggacgagcgtgaactaagcgccgatactcctattgatgatatcgtgagctcacttaat
acctttcccatgggtgcagattttaggctggttattttatatggctgcgatcggcttcct
aagacaatttctgagcccttaattgactatctagcgtcacccgccgcaactaccgtatgc
ttacttgttgctggtagtttggcaaaaaatacgcgcttatataaagcaattgcagccctt
ggaaagcaagctattcttgactgctcacccacaaaggcatatgaactcccacgtctagca
attaaacaaatgcaagggctctatcaaaagcagcttgatatgtctgccgcacaggaactc
attacgcgtattggtgatgatgagcgcctattagcaacaacacttgaacgcttagcgcaa
caagtgaatgtgccccaggtttcaaaacatgatattgaacgtttagttgctcgaaccgca
gaagcacagccctggcctttccttgatgcggtaagcgcgcgtgatgcaaagcaagcaatg
cttttactgcgtcgtatgccacaagggtctgaagtatatctgcagagcttagtggttcgg
cgtttgcgtgagcttttgattgcgcagtgtttggacgaacgccgagagtcaggcagctta
tcaaaacgtttgggtcgtcaggactggcaggttaaacatcatattcattgggcacggggt
ttttcgcatgacgagttaattaacgcgctcagaacagcagcagaccttgagcagacactt
aaaggctccggtgattcagctctagcctttgagctatgggtgatgaatatttgcacaaag
cagagtgtttaa
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