Collinsella sp. zg1085: KPC83_03780
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Entry
KPC83_03780 CDS
T09607
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
coll
Collinsella sp. zg1085
Pathway
coll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
coll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KPC83_03780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
coll03019
]
KPC83_03780
03016 Transfer RNA biogenesis [BR:
coll03016
]
KPC83_03780
Enzymes [BR:
coll01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KPC83_03780
Messenger RNA biogenesis [BR:
coll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KPC83_03780
Transfer RNA biogenesis [BR:
coll03016
]
Prokaryotic type
tRNA degradation factors
KPC83_03780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
DUF2526
FlgM
KH_2
Motif
Other DBs
NCBI-ProteinID:
QWT16987
UniProt:
A0A975SC54
LinkDB
All DBs
Position
902931..905177
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AA seq
748 aa
AA seq
DB search
MTLVSKSFELYGKTYTFEAGELAKQATGAALVKQGDTTVLTTVVVSRERKNYDFFPLTVD
FIEKMYAVGRIPGGYLKRESRPSEKATLTSRMIDRPIRPSFPDGFRNEVQIVATSLVADQ
INPTDVICTMGASLAMTLGGVPFEGPLACVRIGRNRETHEFIVNPTYEERANSDLDLELA
GTRDFISMVEASSDEITEEDMLAAMKFGQEAIGAFCDAQLMFVEAYEELNGAIVQREYPL
DEPSAEVHERVFAHYDEMACALADADKLARQDKVAALKEAIIAEFSDEEQELFERDLPVQ
LKKLEKQAMRMMVVETGERVDGRRADEIRPLMVKPNYLPLVHGSGLFQRGQTQVLSVLSL
GMLNEAQRLDTIEPEETKRYMHHYNFPPYCTGETGRMGAPKRREIGHGNLAERALLPVLP
TETDFPYAIRVVSEVMESNGSSSMASTCGSTLALMDGGVPLKRPVSGIAMGLIQEAGKTV
VLSDIQGLEDFLGDMDFKVCGTERGITALQMDNKATGLTFEILAQALQQAKEGRAHILNT
MLQAISMPRETTRPTAPRIVSITVPVDKIREVIGTGGKVIRAIQDETGASVDIQEDGTVY
VGGTGDTVEMAIERIQLIVKVPEVGETYSGRVVALQPFGAFVNLLPGKDGLLHISRAAKG
RVEKIEDVLNVGDEVQVEVIEVDDRGKISLDRLDKPEAPGSANADAPRRERSDRPRRSRA
PREFDYTDRRSPGDGGGRTPRRRHVESE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgacactcgtatccaagtcctttgagctgtatggcaaaacctacacctttgaggcaggt
gagcttgcaaagcaggccaccggtgccgcgcttgtaaagcaaggcgacaccaccgtttta
accaccgttgttgtttcgcgtgagcgtaaaaactacgacttcttccccttgacggtagat
tttatcgagaaaatgtatgcggtaggccgtattccaggaggctatctcaagcgtgagagc
cgaccctctgaaaaggctaccttaacttcacgtatgattgaccgtcctattcgtccaagc
tttcctgatggctttcgcaatgaggtacaaattgttgctacttcattggttgcagatcag
ataaatcctaccgatgtcatatgcactatgggtgcctctttagccatgacacttggagga
gtgccctttgaggggcctttggcttgtgtgcgcattggccgcaatcgtgagacccatgag
tttatcgttaaccccacctatgaggagcgtgcaaactccgacctcgatttagagcttgca
ggtacgcgtgactttatttctatggttgaagcctcttctgatgagattaccgaagaagat
atgcttgccgccatgaagtttggacaagaagctatcggcgcgttctgtgatgctcagctt
atgtttgttgaggcgtatgaagagctcaacggcgccattgttcagcgtgaatatccgctc
gatgagccttctgcagaagttcatgagcgtgtgtttgcacactatgatgagatggcatgc
gcccttgctgatgctgataagctagcacgtcaagataaggttgctgcacttaaagaggct
atcatcgctgagtttagcgatgaggagcaagagctttttgagcgcgatttgcccgttcag
ctcaaaaaacttgagaagcaggcaatgcgtatgatggtagttgagactggcgagcgtgtt
gatggtcgccgtgccgatgaaattcgtccgcttatggtgaaacccaactatctgcccctc
gtacatggctctggtttgttccagcgcggacaaacgcaagtcctttcagtgctctcgctc
ggcatgctcaatgaggcgcagcgtcttgataccattgagcctgaagagacaaaacgctat
atgcatcactacaatttcccgccgtattgcaccggtgagactggtcgcatgggtgcacct
aagcgtcgagaaattggtcatggcaaccttgctgagcgcgcgctcttgcccgtactgccc
actgagaccgatttcccgtatgccattcgtgttgtatctgaggttatggaatcaaacggc
tctagttcaatggcatctacctgcggtagcacgctagcacttatggatggtggcgtgccg
cttaaacgtccggtctcaggaattgctatgggtcttattcaggaggcgggtaagaccgtt
gtgctttctgatattcaaggccttgaggacttcctcggtgatatggactttaaggtatgt
ggtaccgagcgtggtattaccgcgttgcaaatggataacaaagcaacgggcctcaccttt
gagattctagctcaagccttgcaacaggcaaaagagggtcgtgcccatattcttaacacc
atgcttcaagctatttcaatgccgcgcgagacaacacgtcctactgctccgcgcattgta
tctatcacggttccggttgacaaaattcgtgaggttatcggtacaggtggcaaggtaatc
cgcgctattcaagacgagactggcgcttcggttgatattcaagaagatggtacggtctat
gtaggtggcacgggcgataccgttgagatggctattgagcgtattcagctgattgtgaag
gtgcctgaggtaggcgagacctattcgggtcgtgtggtagcgcttcaaccatttggtgca
tttgttaatctgttacctggtaaagacggactcctgcatatttcacgtgctgctaaggga
cgtgttgaaaagattgaagatgtgctcaacgttggcgatgaagtacaggtagaagtaatt
gaggttgatgaccgcggcaagatttcattagaccgccttgataagccggaagctcccggt
agcgcaaacgcggatgctcctcgtcgtgagcgcagcgatcgtccgcgtcgtagccgcgcg
ccgcgtgagtttgactataccgatcgtcgaagccccggagatggtggtggacgcacgcca
cgccgtcgtcatgttgagagcgagtaa
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