Collinsella sp. zg1085: KPC83_03785 Help Entry KPC83_03785       CDS       T09607                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism coll  Collinsella sp. zg1085 Pathway coll03018   RNA degradation Brite KEGG Orthology (KO) [BR:coll00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     KPC83_03785  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:coll03019]     KPC83_03785 Messenger RNA biogenesis [BR:coll03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      KPC83_03785 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1 DUF7684 Lactamase_B_6 Motif Other DBs NCBI-ProteinID:  QWT18282 LinkDB All DBs Position 905454..907118 Genome browser AA seq 554 aa AA seqDB search MREDAPLKIIPLGGLDGIGKNMTLFECGNDMVLVDAGLMFPDDSQPGIDLVLPDYTYVLE HEDKLRGIIITHGHEDHIGALPYLLRDLNTHVPIYSSKLTIGMIQGKIAEFKIRGQKFRE VQSRSHITLGCLRIDFVSITHSIPGAFSLRIKSPQGTVFHTGDYKLDQTPIDGIRPDYAA ITQFGAEGIDLLLADSTNSVRPGFTPSEAAVGPYLFDAIKNARGRVFVATFSSQIHRLQQ VCDAARACKRKVVVTGRSMLTNTRVARELGYLKLDDADLIDAFDLHGIPDEQIVVLCTGS QGEPLSALSRMANGEHKTLSIHEGDTVILSATPVPGNEKAVQQVVNSLAKLGCDVYDKNR CLIHVSGHGSQEELKLMIGMVNPRYFMPVHGEAIHLRAHAKLGEQMGIPRERIFIVDNGD TLEIKHGRVKRGRAVESGVVYVDGLRIGDTDPIVLRDRQKLASDGMVTAVAVINMKRRCV DKVDFSSRGVSFSVDDAFSADAAETIKNTIARGKFNYTASGTDALRKALRDSLSNYIWNH TRTRPMIIPVVMEV NT seq 1665 nt NT seq  +upstreamnt  +downstreamnt atgcgtgaagatgctcccttaaagattattcctttgggcggccttgatggtattggcaaa aatatgacactctttgagtgcggcaatgatatggttttggttgatgcgggtcttatgttt cccgatgattctcagcccggaattgaccttgttttgcccgactacacctatgtactcgag catgaagataagcttcgaggaattattattactcatgggcatgaagaccatattggtgct ctgccatatttgttgcgcgaccttaatacccacgttcccatttattcgagcaagctaacc attggcatgattcagggcaaaattgctgagtttaagattagaggtcaaaagtttcgcgag gtacagagccgctcacatattacgctgggctgcttgagaatagactttgtatccatcact cactcaattccaggcgctttttcactgcgtatcaaaagtccacaaggcactgtttttcac accggcgattataagcttgaccaaactcccattgatggtattcgtcctgattatgcagca attactcagtttggcgctgagggaattgatctcttgctcgctgattcaaccaactccgtg cgccccggttttactccctctgaggcagcggttgggccttacttatttgacgctattaaa aacgcccgtggccgcgtgtttgtagcaacattctcaagtcagatacatcgcctccaacag gtatgtgatgctgcacgggcctgcaaacgtaaggtagtggtaacaggtcgctccatgctc accaatacgcgtgtggctcgtgagcttggctatctcaagctcgatgacgctgatttgatt gatgcgtttgacttgcacggtattcctgatgaacaaattgttgtgctttgcacaggttct cagggagaaccgctctcagcgctttcacgcatggcaaacggcgagcataaaacactttct attcatgagggtgacacagtaatcctctctgccactccggttcccggaaatgaaaaggca gtgcagcaggttgttaacagcttagctaagcttgggtgcgatgtgtacgataagaatcgc tgcttaatacacgtatcaggacacggaagccaagaagagcttaagctcatgattggtatg gttaatccacgctactttatgccggtgcatggcgaagcgattcatttgcgagctcatgcc aagctaggagagcagatgggtattccgcgcgagcgtattttcattgttgacaatggtgat acgcttgagattaagcacggcagagtaaagcgtggtcgagcggttgaatcgggtgttgtc tatgttgatggtctccgtattggtgataccgaccccatcgtcttgcgcgaccgccaaaag ctcgcgagcgatggcatggtaactgcagttgctgttatcaatatgaagcgtcgatgcgtc gataaagttgatttttcatcccgcggtgtatcgtttagtgttgatgatgcctttagtgct gatgccgcagaaactatcaaaaacacaattgctcgtggtaaatttaactatacagccagc ggaaccgatgcgctcagaaaggcgctgcgcgattccttgtcaaactatatctggaatcac acgcgcacacgtcccatgattattcctgtggtaatggaggtctaa

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