Collinsella sp. zg1085: KPC83_04530
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Entry
KPC83_04530 CDS
T09607
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
coll
Collinsella sp. zg1085
Pathway
coll02024
Quorum sensing
coll03060
Protein export
coll03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
coll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
KPC83_04530 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KPC83_04530 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KPC83_04530 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
coll02044
]
KPC83_04530 (ffh)
Enzymes [BR:
coll01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
KPC83_04530 (ffh)
Secretion system [BR:
coll02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
KPC83_04530 (ffh)
Eukaryotic Sec-SRP protein
KPC83_04530 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
cobW
AAA_16
nSTAND3
Zeta_toxin
AAA_33
AAA_30
APS_kinase
MMR_HSR1
AAA_17
NACHT
DUF2299
Thymidylate_kin
Tex_central_region
6PF2K
AAA_28
AAA_5
AAA_18
ResIII
Catalase_C
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QWT17117
UniProt:
A0A975SCN9
LinkDB
All DBs
Position
complement(1056111..1057586)
Genome browser
AA seq
491 aa
AA seq
DB search
MFNSLSDRLADTFDRLRGKGKLTEADITSAMRDIRMALLEADVNFKVVRDFVERTRERCL
TAEVLESLTPAQNVVKIVLDELIVLLGATESKLVLSSRIPNVIMLVGLQGSGKTTAAAKL
AYLLKKQGRSPLLAACDVYRPAAADQLATLGGEIGVPVFRGDGAHPIQIAEDAVREAVNS
MRDVVIVDTAGRLQIDEVMMQEAVDIKRAVKPDQVLMVVDAMTGQDIVNVVATFAERTEF
DGVIVSKLDGDARGGGALSVRAVTGKPIKFASVGEKPDALEVFNPERMAKRILGMGDVVG
IIEKAQEMADAQQMAAAERMLRDGLTMNDLLEQMRTIQKMGGMTKILGMLPGGQRALAKM
GGNLDESNFTRFEAMILSMTSEERLRPSMINGQRRARIARGSGTTPADVNILMKQWGEMN
KMMGRMRNMAQQRGAQKAKGKKGKSKKMRMPGLGNLAGMDMSQLMGGLGGGTAPRSDLDM
LRQMEEQFKRR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatagcttatccgatcgccttgccgatacctttgaccgcctgcgtggcaaagga
aaactaaccgaggctgatattacaagtgctatgcgcgatattcgcatggctttgcttgag
gcagacgttaactttaaggtggtgcgcgattttgttgagcgcacgcgtgagcgctgtttg
acagctgaggtgcttgaatcactgacccctgcgcaaaacgttgtaaaaattgttcttgac
gagcttattgtgctcttaggtgctaccgagagcaaattggtgctatcaagtcgtattcct
aacgttattatgcttgtgggcctccagggttctggtaaaaccaccgctgcggcaaagctt
gcctatctcttaaaaaagcaaggtagaagccctctgcttgcagcatgcgacgtatatcgt
cctgctgcagccgatcagttagctacccttggtggagaaattggcgtaccagtgtttcga
ggtgatggagcccaccccattcaaattgcagaagatgctgttcgcgaggcagtcaatagc
atgcgtgatgtggtgattgtcgatacagcaggtcgcttgcaaattgatgaagtcatgatg
caagaggctgttgatattaagcgcgccgttaagcctgatcaggtgcttatggttgtcgat
gccatgactggtcaagatattgtcaatgttgttgctacttttgctgagcgcactgaattt
gacggcgttatcgtatctaagcttgatggcgatgctcgtggcggcggtgccttatcggtg
cgtgctgttaccggaaaacccattaagtttgcctccgttggtgaaaaacctgatgcgctt
gaggtatttaaccctgagcgcatggccaagcgtattcttggtatgggcgacgtagtgggc
attatcgaaaaggctcaggagatggcagacgctcagcagatggctgcagctgagcgcatg
cttcgcgatggtctgaccatgaacgacttgcttgagcaaatgcgcacaattcaaaaaatg
ggtggcatgactaagattttaggcatgttaccgggtggtcagcgtgcccttgccaagatg
gggggcaatttagacgaatcaaactttacgcgctttgaagccatgattttgtcgatgacc
tctgaggagcgtttgcgcccaagcatgattaacgggcagcgccgcgctcgtattgcacgc
ggctcaggcaccacaccagccgatgtaaatatcctcatgaagcagtggggagagatgaac
aagatgatgggccgtatgcgcaatatggcgcaacaacgcggtgctcaaaaggcaaagggc
aaaaagggtaagagcaaaaaaatgcgtatgccaggtcttggcaatttagccggcatggat
atgagccagctgatgggcggtttaggtggcggtactgctccgcgttctgaccttgatatg
ttgcgccagatggaagagcagtttaagcgtcgatag
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