Collinsella sp. zg1085: KPC83_05105
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Entry
KPC83_05105 CDS
T09607
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
coll
Collinsella sp. zg1085
Pathway
coll03030
DNA replication
coll03410
Base excision repair
coll03420
Nucleotide excision repair
coll03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KPC83_05105 (polA)
03410 Base excision repair
KPC83_05105 (polA)
03420 Nucleotide excision repair
KPC83_05105 (polA)
03440 Homologous recombination
KPC83_05105 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coll03032
]
KPC83_05105 (polA)
03400 DNA repair and recombination proteins [BR:
coll03400
]
KPC83_05105 (polA)
Enzymes [BR:
coll01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KPC83_05105 (polA)
DNA replication proteins [BR:
coll03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KPC83_05105 (polA)
DNA repair and recombination proteins [BR:
coll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KPC83_05105 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KPC83_05105 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
QWT17223
UniProt:
A0A975SCK6
LinkDB
All DBs
Position
complement(1194795..1197563)
Genome browser
AA seq
922 aa
AA seq
DB search
MSDTATYRKTLAVIDGNSLMHRAFHAVPPNMTAPDGRHTNAVFGFLNMFLKMIDAFHPDM
IACAFDKGRPQVRMDMLPSYKAQRPPMDPNLREQFPIIKDLLTQLHIPILEAQGWEGDDI
LGTAARIGEAAGFDVLLITGDRDMYQLSTDHVKIVGTKKGLSDVQIMTPDTVQDLYGGIT
PELVPDFYGLKGDSSDNIPGVPGIGPKKASALIMEYGSLDGVIAHADEVKGKMGENLRAH
IDDALLSRKVATILTNAPVELDVHALEFPAFSASDVAEALGSVGINSMQNRFVALLGDDA
LSAASAPTLDMPHEWVRVDATSDESLALFAQAIMKSIATDAWLGLALDNPDTQDSLFVPA
RTLWIATTDTLFALEEAEGQLIGDSSKLPWDTQAGQVKGVLKLIFEQARVVSADLKELLH
VIAPADSSLSASIDPISIDSSRMFDTTISAYLLDSSRTDFDDAYLCECYLHAAVPLAKED
EGAPKTALPRAAQSAVLSRILREKLYQAMSKAGALQVFTAIEMPLVCVLVDMERTGMSVD
PKRLSEMSNKLAAQIAELDGSIRAMAEDDDFNISSPMQLSKILFDKMGLPTRGLKKTQRG
YYSTNAKVLEELAAEHEFVRLILEYREKTKIKSTYLDTLGDLRRGDGRVHTTYNQTIAAT
GRLSSSKPNLQNIPTRSELGHTVKTAFAVGEGSVFVAVDYSQIELRLLAHLSGDTHLIAA
FNEGEDFHAATAARVFGLDRDKVTSELRSRAKAVNFGIVYGQQAYGLSQTLGISQSEARM
MIDRYFEAYPGVRAYLDETIAFARTHGFAETMFGRRRPIPDIQTRNAAKRMFAERTAMNH
PMQGSAADIIKLAMIDVARCLRSGGFRARMMLQVHDELDFECPRDEFEALGAMVKERMEN
VVELKVPLIADISCGITWAEAK
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacacagcaacttaccgtaaaacccttgccgttatcgatggaaattcgttaatg
caccgtgcgtttcatgcggtacctcccaatatgaccgcacctgacggtcgccacacaaat
gccgtttttggctttctcaatatgtttcttaaaatgattgatgcctttcatcctgatatg
attgcctgtgcctttgataaggggcgtccgcaggtgcgcatggacatgctgcccagctac
aaagcgcagcggcctcccatggacccaaacttgcgtgagcagtttcccattattaaagac
ctgctcacacagctccacattcctattcttgaagctcagggctgggagggcgatgacatt
ttaggaaccgccgcgcgcattggcgaggctgccggatttgatgtgttgctgattacgggt
gaccgtgatatgtatcagctatcaacagatcatgtcaagattgtaggcaccaaaaaaggt
ctttctgatgtgcagattatgacccccgataccgtacaggatctctatgggggcattacg
cctgagctggttccagacttttatggactaaaaggtgatagctccgataatattccgggt
gttccaggtattggtcctaaaaaagccagtgcgctcatcatggagtacggcagtcttgac
ggggttattgcccatgccgatgaagttaagggcaagatgggcgagaatttgcgcgcgcat
attgatgacgcactgctctcgcgcaaagtagcaaccattcttaccaatgcgccggttgag
cttgacgtgcatgctttggaatttcccgcgtttagcgcttctgatgttgcagaggcttta
ggctcggttggcattaactccatgcaaaaccgttttgtcgcgctgctgggtgatgatgct
ctgagcgctgcaagcgcaccgacactggatatgcctcatgaatgggtgagggttgatgcc
acctcagatgaaagcttggctttatttgcacaggcgattatgaaatctattgcaactgat
gcttggctggggcttgcacttgataaccctgatacgcaagatagtctgtttgtgcccgca
cggactttgtggattgctaccacagacacactctttgctcttgaggaggcagaggggcag
cttattggagattcatctaagcttccatgggatacacaggcagggcaggtaaaaggtgtg
ctcaagcttatctttgagcaagctcgagttgtctctgctgacctcaaggagctgctgcat
gttattgcacctgctgattcaagcctttctgcctcaattgaccctataagtattgattca
agcagaatgtttgacaccacaattagtgcctatctattagactcgtcccgtactgatttt
gatgatgcgtatctgtgtgagtgttatctacacgcagcggttccacttgctaaagaagat
gagggtgcaccaaaaactgccttgccgcgtgcggcgcaaagtgccgttttgagccgtatc
ctgcgtgaaaagctctatcaggctatgagtaaagctggagccttgcaggtttttaccgcg
attgaaatgccgctcgtctgcgttttggtggatatggagcgcactggtatgtcagttgat
ccaaagcggctttccgagatgtcaaacaaactagctgctcaaattgctgagcttgacggt
tctattcgtgcgatggcagaagatgatgacttcaatatttcaagcccgatgcagctgtca
aagattttgtttgacaagatggggctgccaacacgtgggctcaaaaagacccaacgtggc
tattattcaaccaatgcaaaggtgcttgaagagcttgcggctgagcatgaatttgtgcgc
ttaatcttggaatatcgtgagaaaaccaagattaaatctacctatcttgataccttgggt
gacttgcgccgaggagacggacgagtacacacaacctataatcaaactattgcagctacg
ggaagactttcgagctcaaagcctaatttgcaaaatatcccaacgcgctcagagcttgga
catacggtaaaaacggcatttgctgtgggcgagggttcggtctttgttgcagttgactat
agccagattgagcttcgtttacttgcgcacctctcgggtgacacacacctgattgctgca
tttaatgagggtgaagattttcatgcagccacagcagcacgtgtttttggattggaccgt
gacaaagttacttctgagctcaggagccgcgcaaaagcagtaaattttgggatcgtctat
ggtcagcaggcatatggtttgtctcaaacactgggtatctcacagtctgaggcacgcatg
atgatagaccggtattttgaggcatatcctggtgttcgggcatatttggatgaaacaatt
gcctttgcccgcacgcatggatttgctgagacgatgtttgggcgacgtcgccctatccca
gatattcaaacgcgcaacgctgcaaagcgtatgtttgccgagcgaaccgctatgaatcac
cctatgcaggggagtgcagctgacattattaagcttgctatgattgacgttgctcggtgc
cttcgctcaggtgggttccgtgcgcgtatgatgctgcaggtacacgatgagcttgacttt
gagtgtccacgcgatgagtttgaggcattgggcgcaatggtaaaagagcgcatggaaaac
gttgtagaactcaaagttccgcttattgctgatatttcatgcggtattacgtgggccgag
gcaaagtag
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