Collinsella sp. zg1085: KPC83_05210
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Entry
KPC83_05210 CDS
T09607
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
coll
Collinsella sp. zg1085
Brite
KEGG Orthology (KO) [BR:
coll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
coll03016
]
KPC83_05210
Enzymes [BR:
coll01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
KPC83_05210
Transfer RNA biogenesis [BR:
coll03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
KPC83_05210
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_1
Acetyltransf_7
SpoVAC_SpoVAEB
Motif
Other DBs
NCBI-ProteinID:
QWT17243
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Position
complement(1224801..1226648)
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AA seq
615 aa
AA seq
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MEDLICRIVDCLRQGQHLDDRALVKLMHEQLRRDGVPKQSYAKRRLLPFYQKVKAEDPKR
WQRWNIDPELERALIALLRMKPRRSASGVATITVITKPWPCSGSCIFCPNDLRMPKSYLH
KEPACERAEQHYFDPYLQVAARLTALKQMGHPTDKIELIVLGGTWSDYPEPYRIWFIAEL
FRALNDDASLQERDVVVVQRRTWYEEHGFPQTEDERVSAVAGLQSQINQGAMSYNTAVER
LYGRHAGWIAAADMQQADMDSLYELQKTNEQAIHRVVGLVIETRPDTVTPEALTSIRALG
CTKVQMGIQSLDQHILDINHRGMGVKRIAHAFAWLRLFGFKLHVHYMVNLMGATPEIDCA
QYRMLVSNPAYCPDEVKLYPCALIESAELNHYYETGAWQAYDEDDLLRVLQDNVLETPPY
CRISRMIRDFSSDDIVAGNKKPNLRQMVERRLSQGSEHTSVQEIRFREVGTAEVDAQSLS
LHEFCYDTSVSTEYFLQWLDATGHIAGFLRLSLPKQELVAAHIDVLPIALGEAMIREVHI
YGATARLGEAGQAAQHTGLGKALIQRALEIADEAGYERMNVISAVGTRGYYERLGFHMHG
LYQQRLCRRDTCDEI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttgatttgtcgcatagtggactgccttcgccaagggcagcatctcgatgac
cgggcgctggttaagcttatgcatgagcagcttcggcgcgatggtgtaccaaaacaaagc
tatgcaaaacggcgacttttacccttttaccagaaggttaaggcggaggaccccaagcgc
tggcagcggtggaatatcgaccctgagcttgaacgcgctttgatagcgcttcttcgcatg
aagccacggcgcagtgcttcgggggtcgccaccattacggttattaccaagccatggcca
tgctcgggttcttgtattttttgcccgaacgacttgcgcatgccaaaaagctatcttcat
aaagagcctgcgtgtgagcgtgcagaacaacactattttgacccctatttacaggtggcg
gcacggctaacagcgctcaaacaaatgggacaccctaccgataagattgaactgattgta
ttggggggtacctggagcgattatcctgagccgtatcgcatttggtttattgcagagctt
tttcgtgcgcttaatgatgatgcttctttgcaagagcgtgatgttgtggttgttcagcgt
cgcacgtggtatgaggagcacggttttcctcaaacagaagatgagcgtgtgagcgcggta
gctggtttacagtcacagattaatcagggtgcgatgagctataacacagctgtagagcgc
ctatatggtaggcacgctggttggattgcggctgcagatatgcagcaggcagacatggat
agcttgtatgagctgcaaaagactaatgaacaggcaatacatcgtgtagttgggcttgtt
attgaaacgcgccctgatacagtaacaccagaggcacttaccagcattcgggcgcttggg
tgcacaaaggtgcaaatgggtattcaaagccttgaccagcatattcttgacatcaatcat
cgcggcatgggcgttaagcgcattgcgcatgcttttgcgtggctgcgtttgtttggcttc
aagcttcacgtgcactatatggtcaatcttatgggagcaactcctgagattgattgcgca
caatataggatgcttgtgagtaatccagcatattgtcctgatgaggttaagctctatccc
tgtgcactcattgagagtgctgagcttaatcactattatgaaacgggcgcgtggcaagcg
tatgacgaggatgatttgctgagagttttgcaggataacgtgcttgaaacgccgccatat
tgtcgcatttcgcgtatgattcgagacttttcttctgatgatattgttgcaggaaataaa
aaacctaatttgcggcagatggttgagcgcaggctttcgcaaggttcagaacatacatcg
gttcaggagattcgctttcgtgaagtgggtaccgctgaggtagatgcgcaaagcttgtct
ctgcatgagttttgctatgacaccagtgtgagcaccgaatactttttacagtggcttgat
gctacaggtcatattgctgggtttttacggctttcattgccaaaacaagagcttgtagct
gcgcatattgatgttttaccaatagctttgggtgaagcaatgattcgtgaggttcatatt
tatggcgcaactgcacgtcttggagaggcgggtcaggcagcgcagcatacgggactggga
aaggctttgatacagcgtgcgctcgagattgcagatgaggctggctatgagcggatgaat
gttatttctgccgttggtactcgtggctattacgagcgcttgggtttccatatgcacggc
ttgtatcagcagcgcctttgcagaagggatacctgtgatgaaatataa
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