Colwellia sp. PAMC 21821: A3Q33_02985
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Entry
A3Q33_02985 CDS
T04816
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
colw
Colwellia sp. PAMC 21821
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
colw03021
]
A3Q33_02985
Transcription machinery [BR:
colw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A3Q33_02985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
DUF5997
Motif
Other DBs
NCBI-ProteinID:
ARD43367
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All DBs
Position
complement(707114..708040)
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AA seq
308 aa
AA seq
DB search
MGIKKQIACSDVAVKDKPKSTKAEMPEEAPSSLDATQIYLSEIGFSPLLTAEEEVYFSRL
ALKGDERSRKRMIESNLRLVVKIARRYNNRGLPLLDLIEEGNLGLIRAVEKFDPERGFRF
STYATWWIRQTIERAIMNQTRTIRLPIHVVKELNIYLRTARELVQKLDHEPTAEDIALEL
DVPVESVSKMLRLNERIASVDSPFGGEGEKVLLDVIPDEKGGGPETKLQTNDIKHSIVDW
LNELNSKQREVLARRFGLLGYEAATLEDVGVEIGLTRERVRQIQVEALKRLRDILSQQNL
SIEALFQV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgggcataaaaaaacaaatagcatgttctgatgttgcagttaaggataaaccaaaaagc
accaaggcagaaatgcctgaagaggcgccttctagtttagatgcaacacaaatatattta
agtgaaatcggattttcaccattattaaccgcagaagaagaagtctacttttctcgcctt
gctctcaaaggtgacgaacgctctcgaaaacgtatgattgaaagtaatcttcgtttagtc
gtaaaaattgctcgccgttataacaatcgtggtttaccgttattagatttaatcgaagaa
ggtaacctaggtctcattcgcgccgttgaaaaattcgaccccgagcgtggctttcgattc
tctacttacgcaacttggtggattcgtcaaacaattgaacgtgccattatgaaccaaacc
cgcactattcgattacctattcatgttgttaaagaacttaatatttacttacgtacagcc
cgtgagctggtgcaaaagcttgaccatgaacctaccgcagaagatattgccctagaactt
gatgttcccgtagaaagtgtcagtaaaatgctacgtttaaacgaacgtattgcttcagtc
gattcgccctttggcggtgaaggtgaaaaagttttattagatgttattcctgatgaaaaa
ggcggcggcccggaaaccaagttacaaacaaacgatattaaacatagtattgtagattgg
ttgaatgagcttaattctaaacaacgagaagtattagcaagacgttttggcttactaggc
tacgaagccgcaacattagaagatgtaggtgttgaaattggcttaacacgtgaacgcgtg
cgtcaaattcaagtggaagcgctgaaacgtttacgcgatattttaagtcaacaaaactta
tctattgaagcgctatttcaagtgtaa
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