KEGG   Colwellia sp. PAMC 21821: A3Q33_03885
Entry
A3Q33_03885       CDS       T04816                                 
Name
(GenBank) type I-F CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
colw  Colwellia sp. PAMC 21821
Brite
KEGG Orthology (KO) [BR:colw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:colw02048]
    A3Q33_03885
Enzymes [BR:colw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A3Q33_03885
Prokaryotic defense system [BR:colw02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    A3Q33_03885
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3_HD DEAD ResIII DUF5982
Other DBs
NCBI-ProteinID: ARD43519
LinkDB
Position
complement(928796..932188)
AA seq 1130 aa
MMVTFVSQCEKNALKKTRRVLDAFANRIGDNTWQTIITEDGLVTVKSMLRQTASKSTAVS
CHWIRSRSRSQFIWVVGNKNKFNAAGVVAVNSTKKNLLNSEIESDWKYLPLIKSLTALSA
LLHDWGKASRLFQEKLSPNSKNKFKGDPLRHEWISVLLLNALVNSKSDETWLTELAQNGF
TETQLKATIKTQNSTPLDKLPNAAKLLAWLIVSHHRLPYSKEDWRCDKAPDIATTLKRIT
QKWGYENKIDEAEYNKRVKHCFEFPNGLLSESIQWTQKIKRWSTSLLNNLPLLESAMKDG
SYRLVLHHARLCLMLGDHFYSSQNAAKNWKNSTGLFANTDRNTSELKQKLDEHLVGVAKN
ALDTAHLLPAFEKEPPVATDIQELRRVSSDPKYKWQDKAVTKINEWKTQQDKKVTGFFAV
NMASTGCGKTFANAKVMRALSADGKSLRYILALGLRTLTLQTGDEYRDRIGLTNADLAVL
IGSRAVAELHNQREIKQDEITDEVLGSESQETLLEEFIDYDCEIPEEGLSTVLTCTKDKQ
FLYAPVLACTIDHLMAATETKRGGRYILPSLRLMSSDLVIDEIDDFTGDDLIAIGRLIHL
AGMLGRKVMISSATIPPDLALGYFNAYKKGWQIFTKSRDEAKAEIGCAWIDEFTTHVHSV
NVIQSNATHGNSALEQYQVNHNNFIDKRVNSLNKQVAKRKADILPCPLIPIEATTTENGC
EESKQSHYFSAVKQATLAKHQQHHSIDSKTAIKVSFGVVRVANISPCVELTKYLLQADYP
QDTQVKVMAYHSQQVLLLRHEQEKHLDEVLKRKEKAGETQQAFSNPVIRNHLDLCAKKSC
AKNNSHINNVLFILVATPVEEVGRDHDFDWAIIEPSSYRSIVQLAGRVRRHRSEEVASAN
ISVMQYNLKTFKANDKQDGKYFIKPGYEDGWAQTLHSHDLNKLVNEVRINKSLNAIPRIK
VPIQADKQLLAFMEHQVTAQQLTNFSAFGANTLQGYLTETWYLTALPQVLTPFRKSEASI
NLFLFYNENEDNCYFTEKDDAGKPLLDMYYQAINRGNIHNIKQIELTEKQQKNLWFERNY
QQLLANYLSEPWLTTRKRVSLRYGEINMVERENAQYEYNDQFGLVKIKKT
NT seq 3393 nt   +upstreamnt  +downstreamnt
atgatggtcacttttgttagccagtgtgaaaaaaatgcgctgaaaaaaacacgccgcgtg
cttgacgcctttgccaatcgtattggtgataatacctggcaaaccatcatcaccgaagat
ggcttagtcaccgtaaaaagtatgctccgtcaaaccgccagcaaaagcaccgcggtaagt
tgccattggatacgttcgcgttcaagaagtcagtttatttgggtggtagggaataaaaac
aagtttaatgcagcaggtgtagtcgcggtgaatagtactaagaaaaatttgttaaatagt
gaaatagaaagtgactggaaatacttaccgttaattaaatcacttacagcgctttcagcg
ttacttcatgactggggaaaagcatctcgtttatttcaagagaagttaagccctaatagt
aaaaataaattcaaaggtgatccgctaaggcatgaatggatttctgttttattacttaat
gccttagtgaatagtaaaagtgatgaaacatggttaaccgaattagcgcaaaacggtttt
actgaaacacagttaaaagcaactattaaaacacaaaactcaacaccattagataagttg
cctaacgcggcaaaactattagcttggttaattgtttcgcatcatcgcctaccctattcg
aaagaagattggcgctgtgacaaagcacctgatatagccactacgcttaaacgtataacc
caaaaatggggctatgaaaacaagatagatgaagcagaatacaacaaacgcgtaaagcat
tgttttgaatttcccaatggtttgttatcagagtcaatacagtggactcaaaaaataaaa
cgttggtcaactagcctactcaataatttgcctttgcttgaatcagcgatgaaagacgga
agttatcgtttggtattacaccatgcgcgtttgtgtttaatgttaggtgatcacttttat
tcatcacaaaatgccgcgaaaaactggaaaaatagtacaggactattcgctaatactgat
cgaaatactagcgagctaaagcaaaagcttgatgagcacttggtaggcgtggcaaaaaac
gccttagacaccgcacatttattacccgcatttgaaaaagagccaccagtggcaactgat
attcaagagttaaggcgggtaagttcagaccctaaatataaatggcaagataaagccgta
accaaaattaatgaatggaaaacacagcaagacaaaaaagtaacaggttttttcgcggtt
aacatggcaagtaccggttgtggtaaaacatttgccaacgctaaggttatgcgtgcgtta
tcggctgacggcaaaagcctgcgttatattcttgctctggggttacgtacattaactttg
caaacaggtgatgaatatcgtgaccgaataggtttaaccaatgcagaccttgcggtatta
attggctcaagggcggttgctgaactgcacaaccaacgagaaattaaacaagatgaaata
actgatgaggttttaggctcagaatcacaagagaccttattagaggagtttattgattat
gactgcgaaatacccgaagaagggctaagtaccgtattaacgtgtactaaagataaacag
tttttatatgcgccagtgctggcgtgcaccattgaccacttaatggcggcaacagaaacc
aagcgaggtggtcgctatattttgccgagtttacggttaatgtcttctgatcttgttatt
gatgaaatagatgattttactggcgatgatttaatcgccattggcagacttattcactta
gcaggcatgttaggtagaaaagtcatgatctcatcggcaactattccgccagatttagcg
ctaggttacttcaatgcctacaaaaaaggctggcaaattttcaccaaaagtcgagacgaa
gcaaaagctgaaataggctgcgcatggatagacgaatttaccacacacgtgcatagcgtc
aatgtgatacaaagcaacgcaacacatggtaatagtgctcttgaacaatatcaggttaat
cacaataactttatcgacaaacgtgttaacagtctaaataagcaagtagctaaacgtaaa
gctgacattctgccttgcccactaataccgatagaagcaacaacaacagaaaatggatgt
gaagaaagtaaacaatctcattatttttcagcagtaaaacaagctactttagccaaacat
caacaacaccatagcattgatagcaaaacagcaataaaggtttcattcggcgttgttcgt
gtagctaatatttcgccctgtgtagaattaaccaaatacttactacaagccgactaccca
caagatacccaagtaaaagtaatggcatatcacagccaacaagttttgttactgcgtcat
gaacaagaaaaacaccttgatgaggtgttaaaacgaaaagaaaaagcaggagagactcag
caagcattttccaaccccgtgatccgcaatcatcttgacttatgtgcaaaaaaatcatgc
gctaaaaataatagccatattaacaatgtactgttcattttagtggcaacgcctgttgaa
gaagtcgggcgagatcatgattttgactgggcaattattgaaccatcatcttatcgctca
attgtacaacttgccgggcgcgttcgacgacatagatcggaagaagtagcatcagccaac
attagtgtaatgcaatataacctcaagacatttaaagctaatgataagcaagatggtaag
tatttcattaaaccaggctatgaagatggttgggctcaaacactacacagccatgatctt
aataaattagtgaatgaagtacgtattaacaaaagtttaaatgccattcctaggataaaa
gtacctatccaagcagataagcagttattagcgtttatggaacatcaagtaactgcgcaa
caacttacaaacttttctgcatttggcgcaaacactttacaagggtatttaaccgaaacc
tggtacttaacagctttaccacaagtattaaccccttttagaaaaagtgaagcgagtatt
aatttatttttgttttataacgagaatgaagataactgttattttaccgaaaaagatgat
gcgggtaagcctttgttagatatgtattatcaggccataaatcgaggaaatattcacaat
attaagcaaatagaattaacagaaaaacagcaaaaaaacttatggtttgagcgcaattac
caacagttattagcgaattacctcagtgaaccatggttaacaacacgaaagcgagtctca
ttgcgttacggggaaataaatatggtagagcgtgaaaatgcacagtacgaatataacgac
cagtttgggttagttaaaataaaaaaaacctga

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