Colwellia sp. PAMC 21821: A3Q33_05185
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Entry
A3Q33_05185 CDS
T04816
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
colw
Colwellia sp. PAMC 21821
Pathway
colw00260
Glycine, serine and threonine metabolism
colw00460
Cyanoamino acid metabolism
colw00630
Glyoxylate and dicarboxylate metabolism
colw00670
One carbon pool by folate
colw00680
Methane metabolism
colw01100
Metabolic pathways
colw01110
Biosynthesis of secondary metabolites
colw01120
Microbial metabolism in diverse environments
colw01200
Carbon metabolism
colw01230
Biosynthesis of amino acids
colw01240
Biosynthesis of cofactors
colw04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A3Q33_05185 (glyA)
09102 Energy metabolism
00680 Methane metabolism
A3Q33_05185 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A3Q33_05185 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
A3Q33_05185 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
A3Q33_05185 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
A3Q33_05185 (glyA)
Enzymes [BR:
colw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
A3Q33_05185 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ARD43752
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Position
complement(1238435..1239691)
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AA seq
418 aa
AA seq
DB search
MFTRDMNIADFDPELYQAMSNEVVRQEEHIELIASENYCSPRVLEAQGSQLTNKYAEGYP
GKRYYGGCEYVDIAEQLAIDRAKELFGATYANVQPHAGSQANSAVFQALVTPGGKVLGMS
LAHGGHLTHGSHVNFSGKSYEAIQYGLHPETGDIDYVELERLAIEHKPEMIIGGFSAFSG
VVDWARMRKIADKVEAYFFVDMAHVAGLVAAGLYPNPVPHAHVVTTTTHKTLAGPRGGLI
VSACDDEAIYKKLNSAVFPGGQGGPLMHIIAAKAVAFKEALAPEFKVYQQNVLDNAKAMV
AVLQERGYKVVSNSTENHLLLLDLIDKDITGKDADAALGRAHITVNKNSVPNDPRSPFVT
SGLRLGTPAITRRGFGVEETKITTGWICDILDDIENEDVIAKVRAGVSELCARFPVYK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtttacacgtgatatgaatattgcagattttgatccagaactttatcaagcaatgagc
aatgaagttgttcgccaagaagaacatatagaactcatcgcttcggaaaactactgtagt
ccacgtgtactcgaagctcaaggttcacagctgactaataaatatgccgaaggttaccca
ggtaagcgttattacggtggttgtgaatatgttgatatcgctgaacagttagcgattgat
cgcgcaaaagaattatttggcgctacttatgccaacgtgcaaccacatgcaggttcacaa
gctaactcagctgtttttcaagccttagttactcctggcgggaaagtgttaggtatgagc
ttagcgcatggtggtcacttaactcatggctcacatgttaacttttcaggtaagtcatac
gaagcaattcagtacggtttacaccctgaaactggcgatattgattacgttgaattagag
cgtttagcaatagagcataagccagagatgattattggtggtttctcagcgttttctggt
gttgttgactgggcgcgtatgcgtaaaattgccgacaaagttgaggcgtattttttcgtt
gatatggcacatgttgccggcttagttgccgcaggtttatatcctaacccggtgccacac
gcacatgttgttacgacgactacacataaaacattggctggcccacgtggtggcttaatc
gtttctgcttgtgatgatgaagcaatttataaaaaattgaacagcgcagtattccctggt
ggtcaaggtggacctttaatgcacattattgctgcgaaagccgtggcatttaaagaagca
ttagcgccagagtttaaagtgtatcagcaaaacgtattagataacgctaaagctatggtg
gcagtattacaagagcgtggttataaagttgtttctaacagcactgaaaaccatttgtta
ctccttgatcttattgataaagatattaccggtaaagatgcagatgccgcgttaggccgt
gctcatatcacagtaaataaaaactctgtgccaaatgacccacgttcaccatttgtaact
tctggcctacgtttaggtactccagcaattactcgtcgtggttttggtgttgaagaaact
aaaataactactggctggatttgcgatattttggatgacattgaaaacgaagacgttatc
gctaaagttcgcgccggtgttagtgaactttgtgctcgtttccctgtttacaagtaa
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