Colwellia sp. PAMC 21821: A3Q33_05535
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Entry
A3Q33_05535 CDS
T04816
Name
(GenBank) C4-dicarboxylate ABC transporter permease
KO
K11690
TRAP-type transport system large permease protein
Organism
colw
Colwellia sp. PAMC 21821
Pathway
colw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A3Q33_05535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
colw02000
]
A3Q33_05535
Transporters [BR:
colw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
A3Q33_05535
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
Na_H_antiport_2
Motif
Other DBs
NCBI-ProteinID:
ARD43819
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All DBs
Position
1320107..1321453
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AA seq
448 aa
AA seq
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MSAVFEFFSNIIAGELDVYVITFTLVSVMIVLLFLSFPMVVPLSVGALIGLVHFSGIDTG
VIIQQMVTGISPNALIAVPMFILAADIMTRGHTAHNLLGLIESFVGHLRGGLPITACISC
TLFGSVSGSTQATVVSVGQIMRPKLLQAGYKDSFVMALIINASDIAFLIPPSIGLILYGT
LANTSVGELFIAGIGPGILLAVLFSAYCYFYSVYQGDSITLVEKSTMAEKLMAIKKSLLP
LGFPTLIVGGIYSGAVTPTEAASFSVLYAIILECFIYRELKYKDIVDAALSTGLITAVVF
ILVGMGQAFSWYISFEQIPMELLAPLDLEGASKEYVLFVIALSFFVGCMFVDSLVVLVIL
TPIFVPIVTAVGLDPVLVGVMITLQMAVGSATPPFGCDIFTAIAIFNKPYLEVIRGTLPF
ILILFMMSALLIYFPEIALFLRDQAFAK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgtttttgagtttttttctaacatcattgctggtgaactcgatgtttacgtt
atcacctttaccttagtttccgtgatgattgttttactgtttttaagttttcctatggtg
gtacctttatcggttggcgcacttattggtctggtccatttttctggaatagacaccggg
gtgataatacagcagatggttactggcatctcgccaaatgccttgattgcagtaccgatg
tttattcttgctgcagacataatgactcggggacataccgcgcacaatctactgggccta
atcgaatcattcgttggtcatctgcgcggtggtttacctatcactgcttgcattagttgc
actttgtttggctctgtctcaggttcaacccaggcaacagtagtgtccgttggccagatc
atgcggccaaaattgctccaggcgggctataaagacagcttcgtgatggctttaatcatt
aatgccagtgatattgcatttttgattccgccgagtatcggtttgatcctgtacggaaca
ctggcaaatactagtgtcggtgagctgtttattgcgggtatcggtcctgggattttactg
gctgtgctgttttctgcgtattgttacttttatagtgtttaccaaggggatagtattacg
ctggtagaaaaatcaaccatggcagaaaagctgatggcgatcaaaaaatcattattacca
cttggcttcccgacgctgattgtgggaggaatatactccggagctgtaacgcccactgaa
gcggcctcattttctgtactctatgcgattatccttgagtgcttcatttaccgtgaatta
aagtataaagatattgttgatgcggcgttaagcactggcttgatcactgcggtagtcttt
attcttgttggcatggggcaggcgttttcatggtatatctcatttgaacaaatcccgatg
gaactcctggcgccgttagacctggaaggtgcatccaaagaatatgtattgttcgtgatc
gccttatcgttctttgttggttgcatgttcgttgactcgctagtggtcttggttattctg
acacctatttttgtaccgatagtaaccgctgttgggcttgatcctgtattggtaggcgtg
atgatcacccttcaaatggccgttggctcggcaacaccaccctttggttgcgatattttt
accgcgatagcaatctttaacaagccgtatttggaagtaatacgagggaccttacccttt
attttgatcctctttatgatgtcggccctgttaatttattttccagaaatagccctgttt
ttgcgtgaccaagcttttgccaagtaa
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