Colwellia sp. PAMC 21821: A3Q33_07975
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Entry
A3Q33_07975 CDS
T04816
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
colw
Colwellia sp. PAMC 21821
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
colw03021
]
A3Q33_07975
Transcription machinery [BR:
colw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A3Q33_07975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
GntR
SWC7
HTH_25
DUF7645
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
ARD44256
LinkDB
All DBs
Position
complement(1890177..1891040)
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AA seq
287 aa
AA seq
DB search
MSESMQSMALTVPKSGSIEAYVQSAYSIPMLTAEKEQELATRLYSENDLKAAQELIMSHL
RFVIHVAKGYAGYGLPQADLIQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEFVL
KNWRIVKVATTKAQRKLFFNLRKNKKRLGWFSHEEVNNVAETLGVTTKDVLEMESRMSNQ
DQAFELSTDDDDNASASTYSPAQYLEDKQSDLATEVEDSNWEQHANKRLSNALVGLDDRS
QDIIRTRWLHDDKTTLQELANKYEISAERVRQLEKNALAKLKGAMAA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatcaatgcaatcaatggcgttaactgttcctaaaagtggcagcattgaggca
tacgtgcagtcagcgtatagtattccaatgttgacagctgaaaaagagcaagagctagca
actcgtttatattctgaaaatgatttaaaagcggcgcaagaattaattatgtcgcatctt
cgttttgttatccatgttgctaaaggttatgcaggctatggtttaccgcaagctgattta
attcaggaaggtaatatcggtttaatgaaagcggttaagcgcttcaacccagaagtcggc
gttcgtctagtatcttttgcagtacactggattaaagcggaaattcatgaatttgtgctt
aaaaattggcgcatcgttaaagttgcgacgactaaagcacaacgcaaattattttttaac
ctacgtaaaaataaaaagcgtttaggttggtttagtcatgaagaagtaaataatgttgcc
gaaacactaggtgttacgactaaagatgtcctggaaatggaatctcgcatgagtaaccaa
gaccaagcatttgaattatcaactgatgatgacgataatgcgagtgctagtacttattca
cctgcgcaatatttagaagataaacaatccgatcttgctactgaagtagaagattcgaat
tgggagcaacatgctaataaaaggctaagtaatgctttggtaggtttagatgaccgtagc
caagatattattcgtactcgttggttacatgacgataaaacaactttacaagagttggca
aataagtatgaaatatcagccgagcgtgttcgtcagctagaaaaaaatgcgctagccaag
ttaaaaggcgcaatggctgcatag
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