Colwellia sp. PAMC 21821: A3Q33_08170
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Entry
A3Q33_08170 CDS
T04816
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
colw
Colwellia sp. PAMC 21821
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
A3Q33_08170
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Paralog
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
HHH_3
Tex_N
HHH_9
S1
YqgF
HHH_7
OB_PDCD11
S1_RRP5
T4SS_Lem8
EcpC_N
RNase_II_C_S1
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
ARD44293
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Position
1949216..1951555
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AA seq
779 aa
AA seq
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MTPIAEQIAKEIDVKTSQINAAINLLDEGATVPFIARYRKEATQGLDDNHLRHLAQRLVY
LRDLADRRKVIISNIEQQGKLTPALAAELNNADNKTRLEDLYLPYKPKRKTKGQIAITAG
LEPLANKIYNNWQLNPEQEAKAFINKEQGFSDESSVLEGALYILVERFAEDANLIQKLRR
HLLKQAHLCSKLIKGKEKEAAKYRDYFKHSELLKSVPSHRMLAMLRGRNEKLLSLSIDTD
PGQEGAFSSAQQLITEHFNLRLTGQAAAEFLTKVVLTTWKIKLSQSLETELLGQLREQAE
IEAIKVFSRNLSDLMMAAPAGAKTTLGLDPGLRTGCKLAIVDATGKLLQTATIFPHAPQN
HWDKSVRTLVNLCQQHKVELVAIGNGTASRESDKLIADVIAKLENNKPTKVIVSEAGASV
YSASEFAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKAIGVGQYQHDVSQSQLSQT
LDNVIEDCVNAVGVDLNSASAALLSRVSGLNKTMANNVVSFRDEHGRFNNRNELKKVARL
GPKAFEQAAGFLRIHNGNNPLDFSGVHPETYSLVEQLLKQLNTDISHVIGNKAELEKINV
EALMSDAFGELTVKDIISELEKPGRDPRPEFKTATFQEGVNTINDLKVGMILEGVISNVA
NFGAFVDVGVHQDGLVHISSLTDKFVSDPHEIVKAGEVVKVKVTEVDPQRKRISLTMRLD
EATPQVKSQPSEKSQKTQHNDKNAKPLHNKNKARTSQPKVDNNAAMGNAFADAFAKLKK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgacacccattgctgagcaaatagccaaagaaatcgatgtaaaaaccagccaaataaat
gctgctataaacttattagatgaaggtgcaacggttccttttattgctcgttatagaaaa
gaagctacccaagggcttgatgacaatcatttacgccaccttgcgcaacgcttagtgtat
ttacgcgatttagccgatcgtcgaaaagttattatcagcaatattgaacagcaaggtaaa
ttaacgccagccttagccgccgagcttaataatgccgacaacaaaacccgtttagaagat
ctctatttaccctataagccaaaaagaaaaaccaaaggacaaattgccattaccgcgggt
ttagagccgttagccaataaaatttataataattggcagcttaaccctgagcaagaagcc
aaagcctttatcaataaagagcaggggtttagtgacgaaagttcagtacttgaaggcgca
ctttacattctggttgaacgttttgctgaagacgctaacttgatccaaaaattacgtcga
catttacttaagcaagctcacttgtgcagtaagttgataaaaggtaaagaaaaagaagcg
gcaaaataccgcgattattttaagcattcagaattactaaaatcggtgccgtcgcaccgc
atgttagcgatgttgcgtggtcgtaatgaaaaactattatcgttaagtattgatacagac
ccagggcaagaaggcgcattttctagcgcacaacaactgatcaccgaacattttaattta
cgcttaacgggccaagccgccgcagagtttttaactaaagtggtgctaaccacatggaaa
ataaaactcagccaaagtttagaaacagaattattaggccaattacgggaacaagcagaa
attgaagcgattaaggtgttttcgcgcaatttaagcgacttaatgatggcagcgccagcc
ggtgctaaaaccacgttaggtttagatcccggcctaagaactggctgtaaattagctatt
gttgatgccacgggtaaattattacaaacggcgactatatttccgcatgcaccgcaaaat
cattgggataaatcggtacgtactttagtgaatttatgtcagcaacataaagtagagtta
gtggcgataggtaacggcacggcgtcgcgcgaaagtgacaaacttatcgcagatgttata
gctaagctagaaaacaacaagccaaccaaagtgattgtgagtgaagctggcgcatcggta
tattctgcctcagaatttgctgcaaaagaatttcctgacttagatgtgtcaattcgtggt
gcagtatcgattgctcgccgcttacaagacccactagcagagctagttaaaatagaccct
aaagccataggggttgggcaatatcaacacgatgttagccaaagccaacttagtcaaacc
ttagacaatgttattgaagattgtgtaaacgcggtcggtgttgacttaaatagtgcttct
gcggctttattatcgcgagtttcgggtttaaacaaaaccatggcaaataacgtggtgagt
tttcgcgatgaacatggtcgatttaacaatcgaaatgaattaaaaaaagtcgcgcgttta
gggccaaaagccttcgaacaagcggctggatttttacggatacataatggtaataatccg
ttagatttctcaggagttcaccctgaaacctatagtttagtagaacagctgttaaaacaa
cttaacactgacatcagtcatgttatcggtaataaagctgagttagaaaaaattaatgtt
gaagcgttaatgagcgatgcttttggtgagctaacggttaaagacattattagtgagcta
gaaaagcccggccgtgatccgcgtccagaattcaaaacggcaacttttcaagaaggagtt
aataccattaacgaccttaaagttggcatgatactcgaaggcgttatctctaacgtggcg
aattttggcgcttttgtcgatgtgggcgttcatcaagatggtttagtgcatatttcatca
ctaaccgataagtttgttagtgacccacatgaaattgtcaaagctggtgaagtggttaaa
gttaaagttacggaagtcgacccacagcgtaagcgcattagcttaaccatgcgtttagat
gaagcaacacctcaagttaaaagccaaccgtcagaaaagtcgcagaaaacgcaacacaat
gacaagaacgctaagcctctacataacaaaaataaagctagaacttcgcaacctaaagta
gacaataatgctgctatgggtaacgcctttgcagatgcttttgctaagttaaagaaataa
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