Colwellia sp. PAMC 21821: A3Q33_10180
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Entry
A3Q33_10180 CDS
T04816
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
colw
Colwellia sp. PAMC 21821
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
colw03400
]
A3Q33_10180
Enzymes [BR:
colw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
A3Q33_10180
DNA repair and recombination proteins [BR:
colw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
A3Q33_10180
Prokaryotic type
A3Q33_10180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ARD44645
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Position
2382176..2383579
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AA seq
467 aa
AA seq
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MSLLLWFRNDIRIHDNPALDYFLEQNKGAETAKAIFFVSEKQWLAHDWSAIKIDFIKRHV
NALAEQLLSLNITLEVVHCDDFSAQISFLQQYCQQHNVSEVVANQELEFNEKQRDKSCIE
QGIPLRMFESDVIVKKGKVLNKTGEMYKVFTPYKRAWLTYVKQHGFDYLGKPSTRVSKQQ
SDEVKLTFKAPLSCAGESDAWPLADQVEQQVIPEFYEYKVASYGKKRDFPAIKATSGLSP
YLAIGAISPRYLLLLFIQRFPDILVASDSEEFTWLNELIWREFYRNLIFHRQNLSKHQCF
NPKYHGVVWPNNNELFTLWCQGKTGYPLVDAAMRQLNQTGWMHNRLRMVVASFLTKHLLI
DWRWGEKYFMQQLIDGDLAANNGGWQWAASTGCDAQPYFRVFNPIRQSERFDPKGEFIRK
FIPELAQLPDKEIHFPHQYIAKEKLSLYWPAIVDHKEARLAALDFYR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgttactttggtttcgcaacgatattagaattcacgataatcctgccctagat
tatttcctcgagcaaaataaaggcgctgagacggctaaggcgatcttttttgtcagtgaa
aaacaatggttagctcatgactggtctgcaataaaaattgattttattaagcgtcacgtt
aatgcgttggctgagcagttgctgtcgctaaatattaccttagaggttgtgcattgcgat
gacttttcggcgcaaatttcatttttacaacaatattgccagcagcataatgttagtgaa
gtggtggcgaatcaagaactagagtttaatgaaaagcaacgggataagtcttgtattgag
caaggtattccgctgcgtatgtttgaaagcgatgtcattgtcaaaaaaggcaaagtgtta
aacaaaactggcgagatgtacaaggtatttaccccttacaaacgcgcttggttaacctat
gtaaagcaacacggttttgattatcttggcaaacctagcacaagggtttctaagcagcag
agtgatgaagtaaagctaacgtttaaggcgcctttaagttgtgcaggagaatctgatgca
tggcctttagctgatcaagttgaacaacaagttattccagaattctacgaatacaaagtc
gcaagttatggcaaaaaacgtgattttcccgccattaaagctacgtctggcttatcaccc
tacttagcgataggtgctattagccctcgttatttactgttgttatttattcagcgtttt
cctgatattttagttgcctcagacagtgaggagtttacttggttaaacgaactaatttgg
cgagagttttaccgtaatttaatttttcaccgacaaaatctctctaaacatcaatgcttt
aatcctaagtatcatggcgttgtttggcctaataataatgagctgtttacactgtggtgt
cagggtaaaaccggttacccgctggtcgatgctgcaatgaggcaacttaatcaaacaggg
tggatgcataatcgattgcgtatggtggtagcaagtttcttaacaaagcacttactgatt
gattggcgctggggagaaaaatactttatgcagcagcttattgacggcgatcttgctgca
aataacggtggctggcagtgggcagcaagtaccggttgtgatgcacaaccttactttcgg
gtatttaacccgataagacaaagcgaaagatttgatccaaaaggcgagtttatacgtaaa
ttcataccagagctggcgcagttgcctgataaagaaattcactttcctcatcagtatatt
gctaaagaaaaattatcactttattggccggcaatagtggatcacaaagaagctagatta
gcggcactagatttttatagatag
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