Colwellia sp. PAMC 21821: A3Q33_11135
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Entry
A3Q33_11135 CDS
T04816
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
colw
Colwellia sp. PAMC 21821
Pathway
colw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3Q33_11135 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
colw03019
]
A3Q33_11135 (groEL)
03110 Chaperones and folding catalysts [BR:
colw03110
]
A3Q33_11135 (groEL)
03029 Mitochondrial biogenesis [BR:
colw03029
]
A3Q33_11135 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
colw04147
]
A3Q33_11135 (groEL)
Enzymes [BR:
colw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A3Q33_11135 (groEL)
Messenger RNA biogenesis [BR:
colw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A3Q33_11135 (groEL)
Chaperones and folding catalysts [BR:
colw03110
]
Heat shock proteins
HSP60 / Chaperonin
A3Q33_11135 (groEL)
Mitochondrial biogenesis [BR:
colw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A3Q33_11135 (groEL)
Exosome [BR:
colw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A3Q33_11135 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
A3Q33_11135 (groEL)
Exosomal proteins of breast cancer cells
A3Q33_11135 (groEL)
Exosomal proteins of colorectal cancer cells
A3Q33_11135 (groEL)
Exosomal proteins of bladder cancer cells
A3Q33_11135 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ARD44812
LinkDB
All DBs
Position
2613472..2615121
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDVLFGNDARAKMLKGVNILADAVKVTLGPKGRNVVLDKSFGGPTITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVNEGLKSIAAGMNPMDLKRGI
DKAVIAAVEALKGLSQECNDTKAIEQVGTISANSDETVGKIIATAMDKVGTEGVITVEEG
QALTDELDVVEGMQFDRGYLSPYFINNQESGSVELENPFILLVDKKVSNIRELLTTLEGV
AKAGKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTKATV
ISEEIGMELEKTTLEDLGQAKRVVISKDNTTIIDGIGEEAEIKARVAQIRGQIEDSSSDY
DKEKLQERLAKLAGGVAVIKIGAATEMEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RAADAIKDLEGINEDQTHGINVAIRAMSAPLRQIATNSGDEASVVLNQVRTGGTGNYGYN
ASNSTYGDMLEMGILDPTKVTRSALQFAASIAGLMLTTEAMITDAPTKDAGGMPDMGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtattatttggtaacgacgcccgcgcaaaaatgcttaaaggtgtc
aacatacttgcagacgcagtaaaagttacattaggccctaaaggtcgtaacgtagtgtta
gacaaatcatttggcggcccaacgatcactaaagatggtgtatcagttgcgaaagaaatc
gaattagaagataaattcgaaaacatgggcgcacaaatggttaaagaagttgcttctaaa
gccaatgacgaagcaggtgacggtacaactacggcaactgttttagcacaagcgattgta
aacgaaggtttaaaatcaattgctgcaggcatgaacccaatggatcttaaacgtggtatc
gacaaagcagttattgctgcagttgaagcacttaaaggtttatcacaagaatgtaacgac
accaaagccattgagcaagtaggtactatttctgctaactctgatgaaactgttggtaaa
attattgcaaccgcaatggacaaagtaggcactgaaggtgttattactgttgaagaaggt
caagccctaacagacgagctagacgttgttgaaggcatgcaattcgaccgtggttacctt
tctccatatttcatcaataaccaagaaagcggtagtgttgaattagaaaaccctttcatc
ttattagttgataaaaaagtatctaatatccgtgaattgttaacgacacttgaaggtgtt
gctaaagcgggtaaaccactacttattattgctgaagacgttgaaggcgaagcacttgct
acattagtagtgaacaacatgcgtggtatcgtgaaagttgctgctgttaaagcaccaggt
ttcggcgaccgtcgtaaagccatgttacaagacatcgcaacattaacaaaagcgactgtg
atatctgaagaaatcggtatggagcttgagaaaacgactttagaagacttaggtcaagct
aaacgtgtagttatctctaaagacaatacaacgatcattgacggtattggcgaagaagct
gaaattaaagctcgcgttgcacaaattcgtggtcaaattgaagattcttcttcagattac
gacaaagaaaaattacaagaacgtttagctaaattagctggcggtgttgcggttatcaag
attggcgcagcaacagaaatggaaatgaaagagaaaaaagcccgtgttgaagatgcatta
catgcaactcgcgcagcggttgaagaaggcgtagttgctggtggtggtgttgcactagtt
cgtgctgcagacgccattaaagacttagaaggtattaacgaagaccaaacacacggtatt
aacgtagctatccgtgcaatgtctgctcctttacgtcaaatcgcaactaactcaggtgac
gaagcctcagtagtattaaaccaagtacgcacaggcggcacaggtaactacggttacaat
gctagcaatagcacttacggcgatatgttagaaatgggtattcttgacccaactaaagta
acgcgtagtgcattacagtttgctgcctcaattgctggcttaatgctaacaacagaagca
atgatcaccgatgcaccaacgaaagatgctggtggcatgcctgatatgggcggcatgggt
ggtatgggcggaatgggcggcatgatgtaa
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