Colwellia sp. PAMC 21821: A3Q33_13175
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Entry
A3Q33_13175 CDS
T04816
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
colw
Colwellia sp. PAMC 21821
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
colw03032
]
A3Q33_13175
03036 Chromosome and associated proteins [BR:
colw03036
]
A3Q33_13175
03400 DNA repair and recombination proteins [BR:
colw03400
]
A3Q33_13175
DNA replication proteins [BR:
colw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A3Q33_13175
Chromosome and associated proteins [BR:
colw03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
A3Q33_13175
DNA repair and recombination proteins [BR:
colw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
A3Q33_13175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
NolB
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ARD45172
LinkDB
All DBs
Position
3094133..3094408
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSQLIEKIAAGADISKAAAGRALDSFIEAVTEELKGGEQVALVGFGTFSVRDRAARTG
RNPQTGATIEIAAAKIPSFKAGKALKDACNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaacttatcgagaaaattgctgcgggtgctgacatttctaaggctgcg
gctggtcgtgcattagattcatttatcgaagcagttacagaagagttaaaaggtggcgag
caagtagcactagttggttttggtactttctcagtacgtgaccgtgcagcgcgcacaggc
cgtaacccacaaacgggtgcgactattgaaatcgcagcagctaaaataccatctttcaaa
gctggtaaagcacttaaagatgcttgtaacggctaa
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