Colwellia sp. PAMC 21821: A3Q33_14400
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Entry
A3Q33_14400 CDS
T04816
Name
(GenBank) lipid ABC transporter permease/ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
colw
Colwellia sp. PAMC 21821
Pathway
colw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
A3Q33_14400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
colw02000
]
A3Q33_14400
Enzymes [BR:
colw01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
A3Q33_14400
Transporters [BR:
colw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
A3Q33_14400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
nSTAND3
DEAD
RsgA_GTPase
PixA
RMNT_CmcI
MMR_HSR1
AAA_29
AAA_16
DUF87
Zeta_toxin
BCD
Motif
Other DBs
NCBI-ProteinID:
ARD45377
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All DBs
Position
3403467..3405230
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AA seq
587 aa
AA seq
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MSTKPLQPTTEDTTRQNFKRLLAYAKAYKAAAVVSILGMLGYAAIDSFVFSQLQPLIDKG
LDGQDPEFMKWAPYVIVVMFILRGICHFAGNYTLAWLGNNVVANIRQELFEHVMSMPVAY
HDKESTGSLISKLTFDTEQVLSAVSKALLTLVQQGAFVLGLLIVMFYNSWQLASIFLLIT
PVIAGIVTVVSGRFRTISKGIQNAMGEVTTAAEQTFNGHKVVLTFDGQQREFDRFSKINK
HNRQQRMKMVATQAASVPIIQIIASFALAFVLYVANLDSMRANISAGVFMTVLMCMVTLL
RPLKLLTTVNSEFQKGMAACVSIFGVLDQKTEHDTGTIAIERAKGTLAFEHVNFFYNDDK
EKQALTDLSFTANVGETVALVGRSGSGKSTASSLLLRFYNATTGRVLIDGKDIKDYKLKD
LRKQFAYVSQQVVLFNDSIANNIAYGKPEATREEVEDAARKAHVMEFVEGLPEGLDTNIG
DNGAMLSGGQRQRVAIARALLCDAPFLILDEATSALDTESERHIQDALSILQKNRTCIVI
AHRLSTIESADKIIVMEQGQIKEQGDHQTLLAKDGAYAQLHKFQFGD
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaaaaccactacaaccgactacagaagataccacgcgacaaaactttaagcgc
ctattggcctatgcaaaagcttataaagcggcagccgttgtttcgattttaggcatgtta
ggttatgccgctatcgacagttttgtcttttctcaactgcaaccgttaatcgataaaggc
cttgacggccaagaccctgaatttatgaaatgggcgccgtatgtcattgtggtaatgttt
attttacgtggtatttgtcattttgctggcaattataccttggcttggttaggcaataat
gtggtggctaatattcgtcaagaactgtttgaacacgttatgtctatgccggttgcttat
catgataaagaatctaccggcagcttgatctcaaaattgacttttgatactgaacaggta
cttagtgctgtttctaaagccttattaacgttagtgcagcaaggggcgtttgtactgggt
ttactgatagttatgttttataacagctggcagttagcgtcgatttttttactgatcacg
cccgttattgcgggcatagtgacagtggtttcagggcgttttcgtactatcagtaaaggc
atacaaaatgccatgggcgaggttacaaccgccgcagagcaaacctttaacggccacaaa
gtggtattaacctttgatggtcagcaacgagaatttgaccgtttttcgaaaattaataaa
cacaatcgtcaacaacgtatgaaaatggtagccacgcaagctgccagtgtgcctattatt
caaattattgcctcattcgctttggcgtttgttttgtatgttgccaacctagattctatg
cgcgccaatatttctgctggtgtttttatgacggtactcatgtgcatggtaacgctgctt
cgccctttaaaacttttgacgaccgtgaatagtgaattccaaaaaggtatggccgcttgt
gtcagtatttttggcgtgcttgatcaaaaaacagaacatgatactggtactattgctata
gaacgtgcaaaaggtacattggcgtttgagcatgttaatttcttttataatgatgataaa
gaaaaacaggcacttactgatttaagttttacggctaatgtcggcgaaacggttgcgtta
gtagggcgctcggggagcgggaaatctaccgctagttcattattgttacggttttataat
gccacaaccggtagagttttaatcgatggcaaagatattaaagattacaaattaaaagat
ttacgcaagcaatttgcttatgtttctcaacaggttgtgttatttaatgactctatcgct
aataatatcgcttatggtaaacccgaagccacacgtgaagaagttgaagatgctgcccgt
aaagcgcatgtaatggagtttgttgaaggtttacccgaaggtttagacactaatattgga
gataatggtgcgatgttgtcgggtgggcaacgtcaacgagtagctattgcacgggcattg
ttatgtgatgcacctttcttaattttagatgaagcaaccagtgccctagatactgaatcg
gaacgtcatattcaagacgctttaagtatattgcaaaaaaatcgcacttgtatcgttatt
gcccatcgtttatcaacgatagagagtgctgataaaattattgttatggagcaaggccaa
ataaaagagcaaggtgaccatcaaacattattagcgaaagacggcgcttatgctcagcta
cataaatttcaatttggtgactag
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