Colwellia sp. PAMC 21821: A3Q33_15175
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Entry
A3Q33_15175 CDS
T04816
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
colw
Colwellia sp. PAMC 21821
Pathway
colw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A3Q33_15175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
colw03400
]
A3Q33_15175
Enzymes [BR:
colw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A3Q33_15175
DNA repair and recombination proteins [BR:
colw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A3Q33_15175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
RecD_N
SH3_13
UvrD-helicase
NAT10_TcmA_helicase
UvrD_C
AAA_22
SLFN-g3_helicase
DEAD
AAA_16
Head_binding
PhoH
ResIII
nSTAND3
DUF87
FtsK_SpoIIIE
AAA_25
AAA_5
Motif
Other DBs
NCBI-ProteinID:
ARD45511
LinkDB
All DBs
Position
3602789..3605011
Genome browser
AA seq
740 aa
AA seq
DB search
MPELVISSESKVTSDKESIYASFQYAARQLDGLVAVDYFFAKEISQCLGFNGANTIDKTS
QQETEQQQWFHLLIALSASLRDGHSCLPLAQVAGKRLFTDGMNQSESRTKGFLFSDLETL
TALMAILPIADSNNKDESEQHPIVFNHDRLYLRRYYQFEQELKQVVRERRVISAKSVEPA
SNGSEALDDVGNITNIIATLFPDLASLNHALSDTKSDTKSDTQSDTLSDTQNDTLSDTQN
DTQNDTLSDTQNDTQNSEIDWQAVAVANAINKDFAIIAGGPGTGKTYTVTKLLAALVMLA
RAKVESPNNNQFTAPKISLVAPTGKAAQRLSESITSAVKAFRGTIADEVLDLIPEQAKTI
HRLLGVIPEQVNFRHHQENLLDIDILLIDEVSMVDLPMMARIFRALPINTKVILLGDADQ
LPSVAVGSVLADFAPRPHLGFSALNHQYLAQVTGYKSLTKDEAPDENNAQYSAADCVTFL
MKSRRFDGKGGIGRIANYVINGQYQESWQLLKQSESDNRSSEDEALSNDKQLTLLSGNVE
TWLIPLVEQYYLGLSQCSKVEDAFKLLAKFRILSSTRKGPQGVESLNALVVDILRNKGVI
PFNRFESNTSLYASQPIMINENDYRLGVYNGDIGVLWRNSQGHLMAVFENAQGGYDWILP
SRLPKFETVYAMTIHKTQGSEFEHVAMVLPEQKDNRLLSRELLYTGITRAKLKLSIASSQ
SVWQSGVSQQVKRHSGLAID
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttgttattagcagcgaaagcaaggttaccagcgacaaagagagtatttat
gcctcgtttcagtatgccgctcgtcaattagatggtttggttgctgtagactactttttc
gcgaaagaaataagccaatgtttgggctttaatggtgctaacactatagataaaacaagt
cagcaagagactgaacagcaacaatggtttcatttattaatcgccttaagtgcgagcttg
cgcgacggccacagttgtttgccactggcacaagtcgcgggcaaacgtttgtttactgac
ggaatgaatcaaagcgaatcgcgcactaaaggctttttattttctgatcttgaaacactc
accgcgctgatggcgatactacccattgcggattcaaataataaagacgagtctgagcag
catccgatagtctttaatcatgaccgtttgtatttgcgccgttactatcaatttgaacaa
gaattaaagcaagttgtgcgcgaacgacgagttattagcgcaaagtcagttgagccagcg
agtaatggcagtgaagcattagatgatgttggcaatattacaaacattatagcgacgcta
tttccagatttagcgtccctaaaccatgcactaagcgatacaaaaagcgatacaaaaagc
gatacacaaagcgatacactaagcgatacacaaaacgatacactaagcgatacacaaaac
gatacacaaaacgatacactaagcgatacacaaaacgatacacaaaatagcgaaatagat
tggcaagccgttgccgtagccaatgccattaataaagactttgccattattgccggtggc
cccggcacaggtaaaacttacaccgtaactaaactgctggctgcgctagttatgctagcc
cgggctaaagtcgaaagcccaaataacaaccagtttacggcaccaaaaatatccttagtg
gcgcctacgggtaaagccgcacagcgtttatcagagtctatcaccagtgcggttaaagct
tttcgcggcactattgctgacgaagtattagaccttattccagagcaagctaaaactatc
catagattacttggcgttattcctgagcaggtaaactttcgtcatcatcaagaaaattta
ctcgatatagatattttgcttatagatgaagtttcaatggtcgacttacctatgatggcg
agaatttttcgggctttgccaatcaacactaaagttattttattaggtgatgccgaccaa
ttaccttcagttgcggttggcagtgttttagctgattttgcaccacgtcctcatcttggt
tttagcgcattgaaccatcaatacttagcacaagtcactggctataaatcgctgactaaa
gatgaagcacctgacgaaaataatgcacaatacagcgctgccgactgtgtcactttttta
atgaaaagtcgtcggtttgatggcaaaggtggcataggtagaatcgcgaattatgtcatt
aatggtcaatatcaagaaagttggcagttattaaagcaaagtgagagtgataatagatca
tcggaagatgaagctctaagcaacgataaacaattaacattattatcaggcaacgttgaa
acttggctaataccacttgttgaacagtattatttgggcttgtctcaatgtagcaaggtt
gaagatgcatttaaattgttggcaaagtttagaattttatcgtcaacccgcaaaggcccg
caaggggttgaaagcctaaatgctttagttgttgatattttgcgtaataaaggtgttatt
ccgtttaaccgttttgagtcaaatacaagtttgtatgccagtcaaccgatcatgatcaac
gaaaatgactaccgtttaggtgtttataatggcgatattggcgtactttggcgtaatagc
caaggacatttaatggcagtgtttgagaatgcacagggcggttatgactggatcttgccc
tcgcgtttacctaagtttgaaacggtttacgccatgaccatccataaaacccaaggtagc
gagtttgaacatgtcgctatggtgctgcctgagcagaaagacaatagattattgtcgcgt
gaattattatatactggcatcacccgagcgaagctaaagttgagcatcgctagtagtcag
agtgtttggcaaagtggcgtaagtcagcaagttaaacgtcactctgggctcgcaattgac
tag
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