Colwellia sp. PAMC 21821: A3Q33_16245
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Entry
A3Q33_16245 CDS
T04816
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
colw
Colwellia sp. PAMC 21821
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
colw03021
]
A3Q33_16245 (nusA)
03009 Ribosome biogenesis [BR:
colw03009
]
A3Q33_16245 (nusA)
Transcription machinery [BR:
colw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
A3Q33_16245 (nusA)
Ribosome biogenesis [BR:
colw03009
]
Prokaryotic type
rRNA transcription factors
A3Q33_16245 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
KH_2
S1
KH_KhpA-B
DUF2187
Motif
Other DBs
NCBI-ProteinID:
ARD45699
LinkDB
All DBs
Position
3839527..3841023
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AA seq
498 aa
AA seq
DB search
MSKEILLVVDAVSNEKALPRESIFEAMETALETATKKKYEGDILVRVSIDRATGEFETFR
RWLIVEESDTPMENPYAEISLAAAQYDEPELNVGDYVEDQIESVKFDRVTTQTAKQVIVQ
KIREAERGLIVDAYQEQIGEIITGVVKKASRDSVILDLGNNAEAIIYRDDMLPRESFRPG
DRIRGLLYEIKPEARGAQLFVSRTKPEMLIELFRVEVPEIGEEMLEIKGAARDPGSRAKI
SVKSNDKRIDPVGACVGMRGSRVQAVSSELGGERVDIVLYDDNPAQYVINAMAPAEVASI
IVDEDKNTMDIAVEEGNLAMAIGRSGQNIRLASQLTGWELNVMTVADMNEKHQAENDKVL
TLFIDKLDLDEDFALMLVEEGFTSLEEIAYVPVAEMLDIDGMDEDTVEELRERAKAAITT
QALASEETLEGAEPAEDLLNLAGLERHLAFVLASRGITTLEHLAEQGVDEISDIEELDET
KAGELIMAARNICWFNEE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggaaatattactggtcgtagatgctgtttctaatgaaaaggcattaccacgt
gaaagcatttttgaagcgatggaaactgctttggaaacggcgacaaaaaagaaatatgaa
ggcgacattttagtccgtgtaagtattgaccgtgcaacaggcgagtttgagacttttcgt
cgttggttaatcgttgaagaaagcgatacgccgatggagaatccgtatgctgaaattagt
ttggcagcagcgcaatatgatgaaccagaattaaacgttggcgattatgttgaagatcaa
attgaatcggttaagtttgaccgtgtaacaacacaaacagctaaacaagttattgtacaa
aaaattcgtgaagcagaacgtggattaattgttgacgcttaccaagaacaaattggtgaa
attattactggcgtagttaaaaaagctagtcgggatagcgtaattttagatttaggtaac
aacgccgaagcgattatttatcgtgacgatatgttaccacgtgaaagcttccgtccaggc
gatcgcattcgtggtttactttatgaaattaaacctgaagcacgtggcgcacaattattt
gttagccgcacaaaacctgaaatgttaattgaacttttccgcgttgaagtaccagaaatt
ggtgaagaaatgcttgagatcaaaggcgcagcccgcgaccctggttctcgtgcgaaaatt
tcagtaaaaagtaacgacaagcgtattgaccctgtaggtgcgtgtgttggtatgcgtggt
tcacgtgtacaagccgtttcaagtgagttaggcggcgaacgtgttgatatcgttttatat
gatgacaacccagcacaatacgtgatcaatgcaatggcaccagctgaagtggcttctatc
attgttgatgaagacaaaaacaccatggatattgccgttgaagaaggcaacttagccatg
gcgattggtcgtagtggtcaaaatatacgtttagctagccagttaacaggctgggaactt
aacgtgatgactgttgccgacatgaacgagaaacaccaagctgaaaacgataaagtacta
acgctatttattgacaagttagatcttgatgaagattttgctttgatgttagtagaagaa
ggctttacttcgttagaagaaattgcctacgtacctgttgccgaaatgctagatattgat
ggcatggacgaagacactgttgaagaattgcgcgaacgtgcaaaagcggcaattactact
caagcacttgcaagtgaagaaacacttgaaggtgcagaacctgcagaagatttattaaat
cttgccggtttagaacgccatttagcgtttgtattagcaagtcgtggtattacaacttta
gaacaccttgctgaacaaggtgttgatgaaatatcagacattgaagaattagatgaaacc
aaagcgggcgagctaattatggctgcacgtaatatttgttggtttaacgaagaataa
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