Colwellia sp. PAMC 21821: A3Q33_16260
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Entry
A3Q33_16260 CDS
T04816
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
colw
Colwellia sp. PAMC 21821
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
colw03016
]
A3Q33_16260 (truB)
Enzymes [BR:
colw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A3Q33_16260 (truB)
Transfer RNA biogenesis [BR:
colw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A3Q33_16260 (truB)
Prokaryotic type
A3Q33_16260 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ARD45702
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All DBs
Position
3844279..3845223
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AA seq
314 aa
AA seq
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MAKKRKGRAINGVLLLDKPYDMSSNNALQRVKHIYFAQKAGHTGALDPLATGMLPICLGE
GTKFSQFLLDTDKTYQVTAKLGVRTTTSDADGEVVSEKPVDVSAEQLATALDSFRGTTQQ
IPSMYSALKYQGQPLYKYAREGIEVPRESRDITVFRLDLLRFEGDEVDLDIHVSKGTYIR
TIIDDLGELLGCGAHVANLRRSAVGNYPTERMVTMAALEALLAKAEAEEVAPSVYLDPLL
LPMTTACDGIPAVFVDDMSANFLRHGNPVQCSGGPSEGLVQVFIGDDVDTGEFIGVGEID
DDGLVAPKRITVVG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaaagaaaaggccgtgcaattaacggtgttttgttactcgataaaccttac
gatatgtcatctaacaatgcattgcagcgagtaaagcatatttactttgcacaaaaagca
gggcataccggtgctttagatccattagcaaccggcatgttgccaatatgtttaggtgaa
gggactaagttctctcagtttttacttgataccgataaaacttaccaagttactgctaaa
ttaggtgttcgcactaccactagcgatgcagatggtgaagtggttagcgaaaagcctgtt
gatgttagtgctgagcaattagcaacagcattagattcatttcgtggcacaacgcaacaa
attccatcaatgtattcagcattaaagtatcaggggcaacctttatataaatatgcacgt
gaaggcattgaagtaccgcgagagtcacgtgacattacggtatttaggttagatttattg
cgctttgaaggtgatgaagttgatttagatattcatgtatctaagggcacttatatccgc
accattatagacgatttaggtgagcttttaggctgtggcgctcatgttgccaacctacgt
agaagtgcggtgggtaattatccaaccgagcgaatggtgacaatggcagctttagaggca
ttgttagcaaaagccgaggctgaagaagtagctccatcggtttatttagaccctttgcta
ttacctatgaccacagcatgtgatggtataccggcagtatttgttgacgatatgtcagca
aattttttacgccacggtaatcctgtgcagtgctcaggcggtccaagtgaaggcttagta
caagtttttattggtgatgatgttgatacaggtgagtttatcggtgttggtgaaatagat
gacgacggtttagttgcaccaaaacgtattacggttgtcggataa
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