Colwellia sp. PAMC 21821: A3Q33_20375
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Entry
A3Q33_20375 CDS
T04816
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
colw
Colwellia sp. PAMC 21821
Pathway
colw03030
DNA replication
colw03430
Mismatch repair
colw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A3Q33_20375
03430 Mismatch repair
A3Q33_20375
03440 Homologous recombination
A3Q33_20375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
colw03032
]
A3Q33_20375
03400 DNA repair and recombination proteins [BR:
colw03400
]
A3Q33_20375
Enzymes [BR:
colw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A3Q33_20375
DNA replication proteins [BR:
colw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A3Q33_20375
DNA repair and recombination proteins [BR:
colw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A3Q33_20375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ARD46773
LinkDB
All DBs
Position
complement(4855646..4856377)
Genome browser
AA seq
243 aa
AA seq
DB search
MEENTQDERLIILDTETTGINPREGHRIVEIGCVEMINRQLTGRSYHVYVKPMAHGMQMV
MDQEVINIHGLTDDYLRDKPRFEQIGHEFVDFIKGARLVIHNAKFDVGFMDHEFAMMPGM
PKTADICSVTDTLKVSKDEFGSPKTLDYLARFYKVDKLIDRTYHGALIDAQLLAFVYIEM
TRKQATFNLNQGEGQGSDANAIRRVTNDRPKLKVLAATADELTEHENRLAIVNDKGASPL
WLK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
attgaagaaaacacacaagacgaacgactgatcattctggatactgaaaccacaggtatt
aatcctcgtgaagggcatcgtattgttgaaattggttgtgttgaaatgatcaaccgtcag
ctaacgggtagaagttaccatgtgtatgttaagccaatggcacacggcatgcagatggta
atggaccaagaagttatcaatattcatggtttaaccgacgactatttacgcgacaaaccc
aggtttgaacaaataggccatgaatttgtagactttatcaaaggtgctcgtttagttatc
cataatgccaagttcgatgtcggatttatggatcatgaatttgcaatgatgccgggtatg
cctaaaactgctgatatttgtagtgttaccgataccttgaaagtatcaaaagacgaattt
ggttcaccgaaaaccttagattatttagcgcgtttttataaagttgataaattaattgac
cgtacctatcacggcgcattaatcgatgctcagttattggcctttgtttacattgaaatg
acccgtaagcaagcaacttttaatttaaatcaaggggaaggacaaggtagtgatgcaaac
gcgattcgtcgagtgactaacgaccgccctaaattaaaggttttggctgctactgccgat
gaactaacagagcacgaaaaccgtttagcaattgttaatgacaaaggggcttcgccacta
tggttgaaatag
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