Colwellia sp. MT41: CMT41_00360
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Entry
CMT41_00360 CDS
T04159
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
com
Colwellia sp. MT41
Pathway
com03420
Nucleotide excision repair
com03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
com00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CMT41_00360 (uvrD)
03430 Mismatch repair
CMT41_00360 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
com03400
]
CMT41_00360 (uvrD)
Enzymes [BR:
com01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMT41_00360 (uvrD)
DNA repair and recombination proteins [BR:
com03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMT41_00360 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CMT41_00360 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
PhoH
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
ALO33330
LinkDB
All DBs
Position
84787..86961
Genome browser
AA seq
724 aa
AA seq
DB search
MDVSELLDSLNDKQREVVAAPKQNMLVLAGAGSGKTRVLVQRIAWLIQVEKVSSHSILAV
TFTNKAAAEMRARVEQVVAGNTHGMWIGTFHGLAHRLLRMHFKEANLPQSFQVLDSDDQL
RLIKRIVRSLELDEKKWPPKQFVWYINGKKDEGLRPKHIDAQFDPTEELFVKVYKAYQET
CDRAGLVDFAELLLRAHELWLENPVLLEHYQQRFGHILVDEFQDTNAIQYAWLTMLGKAR
SKVMIVGDDDQSIYGWRGAKIENIERFLKEYDDTKTIRLEQNYRSTANILQAANQLISNN
NNRMGKKLWTDGEAGEKISIYTAFNEIDEARFIAGRIKQWRDDGGKLDEIAILYRSNAQS
RLLEEALLQGQLPYRIYGGQRFFERQEIKDTLAYLRLINNRDDDAAFERVINTPTRGIGN
QTLSLIRDAARGMEVTMWQACQHMLQAEQLKGRGAKTITAFIQLIEQLEDDTQNLDLDQQ
ANFVINNSGLKAMYQAEKGERAAQRIENLNELVTACQTFESDPELVEEQSPLTAFLTHAA
LESGESQADEFEAAVQLMTMHSAKGLEFPLVFIAGLEEGMFPSQKSVEEIGRLEEERRLC
YVGMTRAMRKLYLCHAESRRLYGQEKHHKASRFLRELPEECIEEIRMQAQVKRPSKVGRF
SNTFTLETFENTGFKLGQLVKHAKFGEGVVLNYEGSGTQSRIQVNFADVGSKWLVVEYAN
LETA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcagaattactcgactctcttaatgataagcagcgtgaagttgttgctgcc
cctaagcaaaatatgcttgttttggctggcgcaggtagtggtaaaactcgagtattagtg
cagcgtattgcctggttaatacaagtagaaaaagtttcatcacacagcatattggcggta
acctttaccaataaagcggcggcagaaatgcgtgctcgtgttgaacaggtagtggctggt
aatactcatggtatgtggattggcacctttcacggtttagcacatcgtttgttacgtatg
cattttaaagaagccaatttaccgcaaagttttcaagtattagacagcgatgatcaatta
cgcctaatcaaaagaatcgttaggtcactagaacttgatgagaaaaaatggccgcctaag
caatttgtttggtatatcaatggtaaaaaagatgaaggtctacgtcctaagcatatagat
gcccaatttgatcccacagaagagttatttgttaaagtgtataaagcttatcaagaaact
tgtgaccgagctggcttagtcgattttgcggaattattattgcgtgcccatgaattatgg
ttggaaaatcctgtgttgttagaacattaccaacagcgttttggccatattttggtggat
gaatttcaagataccaacgccattcaatatgcttggcttaccatgttaggtaaagctcgc
agcaaggtaatgattgttggagatgatgatcaatctatttatggctggcgtggcgcaaaa
atagaaaacattgaacgatttttaaaagagtatgatgatactaaaacgattcgactcgaa
caaaactaccgctccaccgccaatattttgcaagcagcgaaccaattaattagcaacaat
aataatcgcatgggcaaaaagttgtggaccgatggtgaggctggcgaaaaaatctcaatt
tataccgcttttaatgaaattgatgaagcgcgttttatcgccggtcgtattaaacaatgg
cgtgatgacggtggcaaactggacgaaatagccattttgtatcgctctaatgcgcaatct
cgtttacttgaggaagctctattacaaggacaattaccttatcgtatctatggtggtcaa
cgattctttgaacgacaagaaatcaaagacacccttgcttatctgcgccttatcaataac
cgtgatgatgatgccgcctttgagcgtgttattaatacgccaacccgtggcattggtaat
caaaccttatcgttaattagagatgccgcccgtggtatggaagtaacgatgtggcaagct
tgtcagcatatgttgcaagcagagcaactaaaagggcgaggtgctaaaaccataaccgcc
ttcatccagcttattgagcaattagaagatgatacccagaatttagatttagatcagcaa
gcgaattttgtcattaataatagtggtttaaaggctatgtaccaggcagaaaaaggtgag
cgggctgcccaacgtatagaaaacttaaatgagctggttaccgcctgccaaacttttgaa
agtgatcctgagttagtcgaagagcaaagcccattaaccgcttttctcactcatgcggca
ttagagtcaggtgagtcacaagccgatgaatttgaagccgccgtacagttaatgaccatg
cattcagctaaagggttagagtttcctctggtgtttattgcgggacttgaagaaggcatg
ttcccatcacaaaaatcggttgaagaaatagggcgtttagaagaagagcgtcgattgtgt
tatgtcggcatgacacgagcaatgcgtaagctatacttatgccatgctgaaagtcgtcgc
ttatatgggcaggaaaaacaccataaagccagtcgttttttacgtgaattacctgaagag
tgtatagaagaaattcgtatgcaggcgcaagtaaaacgaccgagtaaagtgggcagattc
tccaacacctttacccttgaaacctttgaaaatacaggttttaagttgggtcagctggtt
aaacatgctaagtttggtgaaggggtagtgcttaactatgaaggtagtggtactcagtcg
cgtattcaggtgaattttgccgatgttggtagtaaatggctagtggtggagtatgccaat
ttagaaacagcctaa
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