Colwellia sp. MT41: CMT41_07460
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Entry
CMT41_07460 CDS
T04159
Name
(GenBank) hypothetical protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
com
Colwellia sp. MT41
Brite
KEGG Orthology (KO) [BR:
com00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
com03021
]
CMT41_07460
Transcription machinery [BR:
com03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CMT41_07460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Rhodanese
Rsa3
Motif
Other DBs
NCBI-ProteinID:
ALO34569
UniProt:
A0A0S2JEW7
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All DBs
Position
1741504..1744578
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AA seq
1024 aa
AA seq
DB search
MKIGVGSLVESESAFKGVGKVVSISSERKSATVGFFTSPLSPSSNQIEVAGSELIGKSKL
FEQTLVYCKVGKSQNWRAGFYDGQRPNDQHLIKYNYADSDVVSIEEIFVPNLVGSPQFCP
ADFLAGRATTSPMYINDRTLFFNSYLNQRASCASISSIPSSAVNLEIHQLSVVLQVLNDD
VQKYLLGDEVGLGKTIEAGFLVREHILEYKDNACVLILTPPSLVQQWRGEMIQKFHLEDV
MDEILDEGDQKVFIGSFQDILTAKFISKKPTMVVIDEGHQLGEFAWGKENKDIFEKIASA
CHNSISTIVLSGTPITGNTKNFLAMLHCLNQDAYPLNDEGITSFNNKIEEREKYSGIYGA
LVPESDDFTLEGIVEQIDNFDFKDNELNLLIDNLKPHIDYFSEDKDENLRKLAIKAVQDY
FGDKYRLFQRFIRNRRGAKNSYIEQMFPGLGESKVVTWKIGNEFVSLDEQLDDYRNSLMH
TEYNFVGITQKNYFQWIDALLISPSSVIAKAQAVIASETNIADEEKLILTTMIEMGHVEQ
SNKDELLLEEITEWLKKNNNGKIVVFCGNKDVADNVYKFIEQHLDSVERHIDGKFPAFNT
SSLYNILICDQSGEDGLNLQGKQRLAVHYSLPRTVMRIEQRIGRLNRYSASSTGVLPVEN
LVLIPYREGFYSSWAKLLKEDIGIFNQNCSSIQLVLDSKIESYSEKIINQGFSQLSQLSE
EIAGESGIVAKERKKVADQEVWNGMQVDLSEIKTFSERLRIVDENADDLSKEMQGWIKNS
LRFDSRTTEDDNFVFQYKVGRTRLNIDEFISHCILGMDFDSGLNSPSTKPMSASRDQSAK
TGSYPFRYGQPFVDTIYSFSQKTTLGISNAIIREINVALSEPKTFFKLDWVCTLESGCQT
RVNQRNKDRKFAPMVLERWVDELGNEVKKEALLNILNKPYEKSRDSTKGLYKDYNVSVGF
ERDLWDLVDSFLNKDEWRDLVLSVASDCKEKVRVELNQQYDLSSSEEFGINLSTMRSVTL
VGKS
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
gtgaagataggtgtaggttctttagttgaaagtgaaagcgctttcaaaggcgttggtaaa
gtggtttctatttctagcgagagaaaaagtgcgacagtggggttctttacttcaccgcta
tctccaagttcgaatcaaattgaagttgccggttctgagctcattggtaaatcaaaatta
ttcgaacaaaccttagtttattgtaaggtcggtaagtctcagaattggcgagcaggtttt
tatgatggacaaagaccgaatgaccaacacttaattaaatataactatgcagattcagat
gtggtttctatagaagaaatatttgtacccaatttagtaggaagccctcaattttgtcct
gctgacttcttagctggaagagcaacaacttcccctatgtacattaacgatcgaacatta
ttttttaattcttatttaaaccaacgagcctcttgcgcctcaatatcctctattcctagt
agtgccgttaatttagaaatacatcaactatctgttgttctccaagtgttgaatgatgat
gtgcaaaaataccttcttggtgatgaagttggtttaggcaaaactattgaagctggtttt
ttggttcgtgaacatatattagaatataaagacaatgcttgcgttctcattttaacccct
ccttctcttgttcagcagtggcggggtgaaatgattcagaaatttcatttagaagatgta
atggatgagatccttgatgaaggagatcaaaaagtttttataggaagcttccaagatatt
ctgacagctaaattcattagtaaaaaacctacaatggttgttatcgatgaaggtcaccag
ttaggtgagtttgcttggggaaaagaaaataaagatatatttgaaaaaatagcatctgct
tgccataactctatatcgacaattgttctttcaggcacacccattacaggaaatactaaa
aacttcttagcgatgctgcattgcttgaaccaggatgcttacccgttaaatgacgaagga
ataacttcatttaataacaagattgaagaaagagaaaaatactcaggaatatatggtgca
ttagttccagaaagtgatgattttacattggaaggtattgttgagcagatagataatttt
gattttaaagacaatgaattaaatttgctaattgataacctgaaacctcatattgactac
ttctcagaagataaagatgaaaatctccgtaagttggcgataaaggcagtacaagattac
tttggggataaatatagactattccaacgttttataagaaacagaagaggagccaaaaat
agctatattgagcaaatgtttccgggtttgggcgaaagtaaggtagtaacatggaagata
ggcaatgaatttgtttcattagatgagcaattagacgattaccgtaatagtttaatgcat
acggagtataactttgtaggaattacacagaagaattatttccaatggatagatgcttta
ctcatatctccatcctcagttatagctaaagcccaggctgtaatcgcatctgaaactaac
attgcagatgaagaaaaattgattttgacaacaatgattgaaatgggtcatgttgaacaa
tcaaataaagatgagttattactggaagagattactgaatggttgaaaaaaaataataat
ggaaaaatagttgttttttgtggaaataaggatgtagctgataatgtttataaatttata
gaacaacacctggattcagttgaaagacatatagatgggaagttccctgcctttaatact
tcatctctatacaatattctcatttgtgatcaatcaggagaggatggtctaaacctacaa
ggaaaacagcgcctagcagtccattatagtttacccagaactgtaatgagaattgagcaa
cgaattggtcgcttaaatagatatagtgcaagcagtactggagtacttcctgttgagaac
ttagtgcttattccatatcgagaaggattttatagttcttgggctaagttattaaaagaa
gatattggtatttttaatcaaaattgctcaagtattcaactggtactagattcgaaaatt
gaatcttacagtgaaaagatcattaatcagggattttcacaattatcacaactttctgaa
gagattgcaggtgaatcagggatagttgcaaaagaaagaaagaaagttgcagatcaggaa
gtatggaatggaatgcaggtagatctttctgaaataaaaacattctcagaaaggctaaga
attgttgatgaaaatgcagatgatttaagtaaagaaatgcaaggttggattaaaaacagc
cttagatttgactctagaacaactgaggatgataactttgtttttcaatataaagtagga
cgaacccgattaaatattgatgagtttataagtcattgtattttaggaatggattttgat
agcggcttaaacagtccttccaccaaacccatgagtgcatctagagatcagagcgcgaaa
accggttcatatccatttaggtatgggcaaccttttgttgatactatttattcattttcc
caaaaaactacgttaggtatatctaatgcgattattagagaaataaatgtagccttaagc
gagcctaaaacattctttaaattagattgggtttgtacattagaaagtggttgtcaaaca
agggttaatcaacggaacaaggatcgaaaatttgcccctatggttctcgaacgttgggta
gatgaattgggaaatgaagtaaaaaaagaggcattattaaatatactgaataaaccttat
gaaaaatcacgagattcaacgaaagggttgtataaggattacaatgttagcgtaggcttt
gaacgtgatctgtgggatttagttgattcatttttaaacaaagatgaatggcgagattta
gtattgagtgttgcctcagattgcaaagaaaaagtaagagttgaacttaatcaacaatat
gatttatcttcaagtgaagagtttggaataaatttatctactatgaggtctgttactttg
gtaggtaaatcgtaa
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