Colwellia sp. MT41: CMT41_08445
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Entry
CMT41_08445 CDS
T04159
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
com
Colwellia sp. MT41
Pathway
com03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
com00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CMT41_08445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
com03400
]
CMT41_08445
Enzymes [BR:
com01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CMT41_08445
DNA repair and recombination proteins [BR:
com03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CMT41_08445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
UvrD_C
RecD_N
UvrD-helicase
Helicase_RecD
AAA_22
AAA_12
SLFN-g3_helicase
AAA_24
nSTAND3
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ALO34739
UniProt:
A0A0S2JFU5
LinkDB
All DBs
Position
1977058..1979142
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AA seq
694 aa
AA seq
DB search
MTEIRVNSRSEQVYSHFNQVKDAIQGVEAIDYFFAKEMFAALIHQTNTETAVDIEPQKTL
YHVFLALSASLRAGHTCLPLAEIAEQHWGKGVPVKNGDNYDFSHAGFVFAPLTELQSLLT
ELTIQAGDQQLLVLHKDKLYLRRYFQFERDLGHAINNRLSQQCQYDNGQIQQCISALFPK
EQGLASLDIDWQKVAVANAINKKFSVIAGGPGTGKTYTVTKLLAALVMLAQLRAKPLAVA
AQSRQGTPTLNIALVAPTGKAAQRLSESIVTAISGFKDLIDAEVLAEIPSQAQTIHRLLG
VLPNSPNFKHHEDNLLAYDIILIDEVSMVDLPLMTRIFRALKDTAKVILLGDADQLPSVA
AGSVLADIAPRPHGGFSSDNVQYLRQVCQLSAEQASEFLSGQLTGHTSNVDYLSFLLKSR
RFDGKGGIGLLANSVIQGDVKRSWQLLCDAHSQQAGQLSLAQGELANWLAPLVKQYYQPI
EFCANVSDAFALLAQFRVLCATRQGDYGVERLNEVIKHYLGKNKALYQQNEPALYHGQPI
MINENDYRLGLYNGDIGIIWRVIDQAGKTHLMACFEDTSLESNTAEDTDTGQQAIRQILP
SRLPKFESVYAMTIHKTQGSEFAHVALVISATQSAAHHKQQRASKLLSRELLYTGITRAK
TQLTIAAHQGIWQQGVSAQVKRHSGLVLCATREK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgactgagattagagtgaatagtaggagcgagcaagtgtatagccactttaatcaagtc
aaagacgctattcaaggtgttgaagccattgattatttttttgccaaagaaatgtttgct
gccttaattcatcagacaaatactgagaccgccgttgatatcgagccgcaaaaaacttta
tatcatgtatttttagccttaagtgctagcctacgcgccggacatacgtgtttgcccttg
gcagaaattgctgagcaacattggggcaaaggcgtgccagtaaaaaatggcgataactat
gatttcagccatgctggttttgtttttgctcccttaactgaactgcaaagcctattaact
gagttaactattcaagccggtgatcaacaattactggtgctgcataaggataagttatat
ttgcgccgttactttcagtttgaacgtgacttaggacatgccattaacaaccgcttaagt
cagcaatgtcagtatgataatggacaaattcaacagtgtatttcggccttattccctaag
gagcaaggcctagcatcgttagacattgattggcaaaaagtggcggtcgctaatgccatc
aataaaaaatttagtgttattgctggcggcccaggtacgggtaaaacctatactgtcact
aaattattagccgcgctggtgatgttagcgcagttaagagcaaagccgttagctgtagca
gcgcaaagtagacagggcacaccgacgcttaatattgcccttgttgctcccacaggtaaa
gcagcacaacgtttgtcagagtccattgttactgccatttctggttttaaagacttaatc
gatgccgaggtgttagcggaaattccgagccaagcacaaaccattcaccgcttgttaggg
gtattgcccaattcgcctaatttcaaacaccatgaagataatctcttagcgtatgacatt
atcttaatagatgaagtctctatggtggatttacccctaatgactcggatatttcgcgcg
ctcaaggatacagcgaaagtcattttattaggtgatgccgatcaattaccctcggtcgca
gctggcagtgtgttagcggatatagcgccacgaccacatggcggctttagctcggataat
gtgcaatatttacggcaagtttgccaactctcggctgagcaagctagcgaatttttatct
gggcagttaacaggtcatactagcaatgttgattacttatcgtttctgcttaaatcaaga
cgttttgacggtaaaggcggtattggtttgctcgccaatagtgttattcaaggtgatgtt
aagcgtagttggcagctactgtgtgatgcacattctcagcaagcgggtcaattatcattg
gcacaaggtgagcttgctaactggttagcgcctttagtgaaacagtattaccagccgatt
gaattttgcgccaatgttagcgatgcctttgccttgttagcacaatttcgggtactttgt
gctacccggcaaggagattatggggtagagcgtctcaatgaggtgattaaacactattta
gggaaaaataaagccctttatcagcaaaatgagccggcgctttatcatggtcagcccatt
atgattaatgaaaacgactaccgtttaggtttgtataatggcgatatcggcattatctgg
cgagtaatagaccaagcaggtaagacacatcttatggcgtgttttgaagacacaagtctt
gaaagtaatacggctgaggacactgacaccgggcagcaagcgataagacaaatattgcca
tcacgcttaccgaaatttgaaagtgtttatgccatgaccattcacaaaacccaaggcagt
gagtttgctcatgttgctctggttatttcagcgacacagagtgcagcacaccataagcag
caaagagcgagtaaactgttatcacgagagttactctacacgggcatcactcgggcgaaa
acacagctgactattgccgcccaccaagggatttggcagcaaggtgttagcgcacaagtt
aagcgtcattcgggtttagttttatgcgcaacgcgtgaaaagtga
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