Colwellia sp. MT41: CMT41_08715
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Entry
CMT41_08715 CDS
T04159
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
com
Colwellia sp. MT41
Brite
KEGG Orthology (KO) [BR:
com00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
com03400
]
CMT41_08715
DNA repair and recombination proteins [BR:
com03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
CMT41_08715
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA
AAA_16
SLFN-g3_helicase
AAA_22
T1R_D3-like
Zn_ribbon_3
Pho88
zf-tcix
DZR
DUF3638
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALO34788
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Position
complement(2035079..2036953)
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AA seq
624 aa
AA seq
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MAVFQLRDYQQEAVAAVLKHFRKTNESAVIVLPTGSGKSLVIAELARLAKRKILVLTHVK
ELVEQNHQKYETYGVTAGIYSAGLKLKETQHQVTFASIQSAARNLHDFSEPYSLIIIDEC
HRVNLASPDTSKAELKDKSKDELKQELKEESSTNQYQQIIQKLMQVNPEVKLLGLTATPY
RLGMGWIYQKHYRGFIRSEQKRPFDRCIYELPLRYLIKRKYLTEPNLVDATIEHYDFSSL
RENASGEYSSTDMNHLLHKNHRVTQGIIEQVIELGHERQGIMIFAATVEHAKEIFSYLPA
TLSALITGATDSTERDNLIKAFKRKEIKYLVNVSVLTTGFDAPHVDMIAILRPTQSVSLY
QQIIGRGLRLSENKKDCLVIDYTGNDFDLYHPEVGEKKPNDKSQPVQVVCPSCEFPNIFW
GICDDDGYLVEHYGRRCQGLVAEPSEEQAKERQCDYRFVFKECPHCGGENDIAARTCLQC
FEVLVDPDDMLKKALQLKDAKIIRCSGMSLDEVSDKGADKGAGKLKITYHDEEGAELNES
FDFSKPNQVKAFNDIFAKRLSVKIGVQLGSTESFEVGNLQQALQLANVLPCPDFVIARKQ
KYYWRIKNRIFDYQGHYRKANELK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
gtggcagtttttcaacttagagattaccaacaagaagccgttgctgcggtgctcaaacac
ttccgaaaaaccaatgaatctgcagtaattgttttacctacgggctcaggtaaaagttta
gtgatcgccgagcttgctcgcttagcaaaacgaaaaatactggtgctgacccacgttaaa
gaattggtagagcagaatcatcaaaaatacgaaacatatggggtaactgcaggtatttat
tcagcgggtttaaaactcaaagaaactcaacaccaagtcaccttcgccagcatacaatcg
gccgcccgaaatctacatgatttcagtgagccctattcattaattattattgacgaatgt
caccgggttaacctagccagcccagacacatcaaaagccgaattgaaagacaagtcaaaa
gatgagttaaagcaagagttaaaggaagagtcaagcactaaccagtatcaacaaatcatt
cagaaattgatgcaggttaatcccgaggtgaaattattgggtttaaccgcaaccccttat
cgtttaggcatgggctggatttatcaaaagcattatcgcggcttcatccgtagtgaacaa
aaacggccttttgatcgctgtatttatgaactaccgctgcgctacttaattaaacgcaag
tatttaaccgaacccaacttagtagatgccaccatagagcactatgactttagtagtctt
agagaaaacgcctcgggcgaatatagttctacggatatgaatcatctcttacataaaaat
caccgggtgactcaaggcattattgaacaggtcattgagttagggcatgaacgtcaaggc
attatgatatttgcggccacggttgaacatgccaaagaaatttttagttacttacccgcg
acactgagtgccttaattaccggcgccaccgacagcactgagcgcgataatttaattaag
gcattcaaacgaaaagagattaaatacctggttaatgtttcggtattaaccactggcttt
gatgcgccccatgtcgatatgatcgcaatattacggccaacacaatcggttagtctctat
cagcaaataatcggtcgtggcctgcgtttgagtgagaacaaaaaagattgcttggtgatt
gactataccggcaatgattttgacctctatcaccccgaagtgggtgagaaaaaaccgaat
gacaaaagccagccggtacaagtcgtttgcccaagttgtgaatttcccaatatattttgg
ggcatctgtgatgatgacggttatttagttgagcattacggccgacgatgccaagggctc
gtagctgaacccagtgaagagcaagcaaaagagcgtcaatgtgactatcgctttgtcttt
aaagagtgcccgcactgtgggggtgaaaatgatattgctgcgcgaacctgtttgcagtgc
ttcgaggtattagttgaccccgatgacatgttaaaaaaggccctgcaacttaaggatgct
aaaattattcgctgttctggaatgagtttagatgaggtctctgacaaaggagctgataag
ggagctggcaagttaaaaatcacttaccatgatgaagaaggggctgaactcaatgaatct
tttgatttttctaaacctaatcaagttaaagccttcaatgatatttttgctaaacgcctt
agtgttaaaattggtgtgcaactgggctcaactgagtcatttgaagtgggcaacctgcaa
caagcattgcagctagctaacgtattaccttgtccggactttgtcattgccagaaaacag
aaatattactggcgtattaaaaacagaatttttgactatcaaggtcactaccgaaaggcc
aatgaactcaaataa
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