Colwellia sp. MT41: CMT41_09005
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Entry
CMT41_09005 CDS
T04159
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
com
Colwellia sp. MT41
Brite
KEGG Orthology (KO) [BR:
com00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
com03009
]
CMT41_09005
Enzymes [BR:
com01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CMT41_09005
Ribosome biogenesis [BR:
com03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CMT41_09005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
ThiS
PUA_3
GlgX_C
DUF6190
S4_2
Motif
Other DBs
NCBI-ProteinID:
ALO34838
LinkDB
All DBs
Position
complement(2100130..2100993)
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AA seq
287 aa
AA seq
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MSDKLRVSEAGSLLIFLNAKLQGWSKKKIKQRLQLGCVLVNGESVVKHDHPLNAGDDVEV
LAQGKRFDASKTKSASAKLEILFSDHDLIVINKPAGLLSVATAQENKVTALAILRNQLSK
AKKAVKLWPVHRLDRDTSGVLMFATSREMREAINAKWAEADKVYLAVVEGVPEPKSGTIN
QPLRLDDKQYKMHVGAHEDAKNAITHFSTVRSVNQRSLLEVKLDTGRQHQIRAHLSWLGY
PIVGDPRYGNDGARMGLHAQRLTITRPKGDRLTIEAPMPNDLITLLR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaattacgagtaagcgaggccggcagcctgttgatttttctaaatgccaag
ttgcaaggttggtctaaaaagaaaattaaacagcgcctgcaactaggttgcgtgctagta
aatggtgagtctgttgttaaacatgatcatccactgaatgccggtgatgatgttgaggta
ttggcacaaggtaaacgttttgacgccagtaaaactaagtctgctagtgcaaaattagaa
atactgtttagtgaccatgatctcattgtcattaataaaccagcgggtttattgtctgtt
gccacggcgcaggagaataaagtgactgcactggcaattttacgtaatcagctatcaaag
gcgaagaaggcagttaaattgtggcctgtacaccgactcgaccgagatacctccggcgta
ttgatgtttgctacttcacgggaaatgcgcgaggctattaatgccaagtgggccgaagcc
gataaagtgtacctggccgtggtagaaggtgtgccagagcctaagagcggtacgataaac
caaccgcttcgcctagacgataaacaatataagatgcatgttggcgcccatgaagacgct
aaaaatgccatcactcattttagtacggtgcgcagtgttaatcagcgctctttattggaa
gttaaacttgatactggtcgtcaacatcaaatacgtgcgcatttatcttggttaggttat
cccatcgtcggtgatccgcgttatggtaatgacggagctcgtatgggacttcatgcacaa
cgcttaaccattactcgaccaaaaggtgatcgactaaccattgaagcaccaatgcctaat
gatttgattaccttattgaggtag
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