Colwellia sp. MT41: CMT41_10150
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Entry
CMT41_10150 CDS
T04159
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
com
Colwellia sp. MT41
Brite
KEGG Orthology (KO) [BR:
com00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
com03016
]
CMT41_10150 (truB)
Enzymes [BR:
com01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CMT41_10150 (truB)
Transfer RNA biogenesis [BR:
com03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CMT41_10150 (truB)
Prokaryotic type
CMT41_10150 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
ALO35035
LinkDB
All DBs
Position
complement(2372441..2373388)
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AA seq
315 aa
AA seq
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MAKRRKGRPINGVLLLDKPYEMSSNHALQAVKRIFFAQKAGHTGALDPLATGMLPICLGE
GTKFSQFLLDTDKTYQVTAKLGIRTTTSDADGEIVSEKAVNVSDEQLAAALDSFRGTTKQ
IPSMYSALKYQGQPLYKYAREGIEVPRVARDITVYNLELLRFEHDEVELNIHVSKGTYIR
TIVDDLGELLGCGAHVADLRRSAVGNYPMDKMVTLPQLEALLEQANEEEISPSELLDPLL
LPMNSAVDGMHCVYVDDMSANFLRHGNPVQAHNSPSEGCVQVYIGEDENDVNAEFIGVGF
IDDDGLLAPKRIVVV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacgtagaaagggccgcccgattaatggcgtattgttattagataagccttat
gaaatgtcatcaaaccatgctttgcaagcggttaaacgcatcttttttgctcaaaaagca
gggcacaccggtgcattagatccattggcaacaggcatgttgccaatttgtttgggtgag
ggcactaagttctcacaattcttgcttgataccgataaaacctatcaagtcacagccaag
ctaggtattcgtaccaccaccagtgatgccgatggtgaaattgtcagtgaaaaagcggtt
aacgtttctgatgaacagttagccgcagctttagatagctttcgcggcaccactaaacaa
ataccttctatgtattcagcacttaaataccaaggccagcctttgtataaatatgccaga
gaaggtattgaggtgccacgagtagcgcgggacattactgtttataaccttgagttatta
cgttttgagcatgatgaagttgaattaaatatccatgtatcaaagggtacttatattcgc
accatagttgatgatttaggtgaactgctaggttgtggcgcacacgtagctgaccttaga
cgctctgccgtggggaattatcccatggataaaatggtaaccctgcctcagcttgaagcc
ttactcgaacaagcgaatgaagaagaaataagcccatcagagttacttgaccccttattg
ctgccgatgaatagtgctgtagatggcatgcattgtgtttatgttgacgatatgtcggca
aatttcttacgccatggtaaccctgtgcaagctcataattcgccaagtgagggttgcgtg
caagtgtatatcggtgaagatgagaacgatgttaacgctgaatttattggagtaggtttt
atcgatgatgatggcttactcgcacctaaacgtatcgttgttgtataa
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